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scnpilot_p_inoc_scaffold_3976_curated_7

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(5801..7489)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 562.0
  • Bit_score: 1064
  • Evalue 0.0
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 560.0
  • Bit_score: 870
  • Evalue 3.30e-250
2-isopropylmalate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSB5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 562.0
  • Bit_score: 1064
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGCTGAAGCAACCTGCAAGCAAGTACGCCGCTTTTCGGCCCGTCGGCCTCAAGGACCGCACCTGGCCAGACGCCGTGATCCAAAAGGCCCCCGCTTGGCTGAGCACCGATTTGCGCGATGGGAACCAGGCACTGATCGAGCCCATGGACCTGGAGCGCAAGCTGCGCATGTTCCAGCAGCTCGTGAAGATCGGTTTCAAGGAAATCGAGGTGGGCTTCCCCTCGGCCTCGCAGATCGAGTTCGACTTCGTGCGCCGCCTGATCGAAGAGAACCTGATCCCCGACGACGTGACGATCCAGGTGCTCACCCAGGCCCGCGAGCCCCTGATCCGCCGCACCTTCGAGGCGTTGCGAGGTGCGCGCGGCGCGATCGTCCACCTCTACAACGCTACTGCGCCGATCATGCGGCGCGTGGTGCTGGGCATGGACGAGGACGCCATCGTGGAGCTCGCCGTGGACAACGCGCGACTGTTCGCCCGCCTGGCGGCCGAGCAGCCGGACACGCGCTGGACGTTCCAGTACTCGCCCGAGATGTTCTCGGGCACCGAACTCGCCTTCTCCAAGCGGGTGGTCGATGCGGTCACCGCGGTCTGGGCGCCCACACCCGAGCACAAGTGCATCGTCAACCTGCCGTCGACGGTGGAGCACAGCACGCCCAATATCTTCGCCGACATGATCGAGTGGATGCACCGCCACCTGGCGCGGCGCGAATCCATCGTCCTGTCGGTGCACCCGCACAATGACCGCGGTACCGGCACGGCGGCGGGCGAATTCGCGCTCATGGCCGGGGCCGATCGGCTGGAGGGTTGCCTGTTCGGCAATGGCGAGCGCACGGGCAACCTCGACCTCGTCAACGTCGCGCTCAACCTCTACACCCAGGGCGTGTCGCCCGGGCTGGATTTTTCCGATATCGACGAGATCCGCCGGACCGTGGAGCACTGCAACCAACTGCCCGTGCATCCGCGCCACCCCTACGTGGGTGACCTGGTCTATACCTCGTTCTCGGGCTCGCACCAGGACGCGATCAAGAAGGCCTTCGCGGCGCGCCGGGCGGACGACATCTGGAACGTGCCTTATCTGCCCATCGATCCCAAGGACCTGGGCCGCAGCTACGAGGCCGTGATCCGCGTGAACAGCCAATCGGGCAAGGGTGGCATCGCCTACCTGCTCGAGACCGAGTACGGCGTGGAGCTGCCGCGCCGCCTGCAGATCGAGTTCAGCCAGGTGGTGCAGGCCGTGATGGACCTGGACGGCAAGGAACTCACGGCCAAGGATTTGTGGCAGTTGTTCGAGCGCGAGTACGCCCTGTCGGCGCCTGCACCTGCGAACGCGACCACCACCGAGCTGGCCGGCGGCAGCGTGCGTGTCACGGCCGACGTGGACTGGGCGGGCGCGGTGGTGCCCGTGCAAGGGCAGGGCAATGGGCCCATCGACGCCTTCGTCAATGCGCTCAACGCGGCCACCGGCCGGTCGGTGCGCGTGCTCGACTACCATGAGCACGCCATCGGCGCCGGTGCCCAGGCGCAGGCCATGGCCTACATGGAACTGCGCGTGGACGAGCGCCACACGGTTTTCGGCGTGGGGCGTGACACGAACATCGTGTCCGCCTCGTTTAAGGCCATCGTTTCGGGCCTGCGGCGCGTGGCGCCCGAGCAGACGCAGGAAACGATGGAACGCGTGGCGCCCTGA
PROTEIN sequence
Length: 563
MLKQPASKYAAFRPVGLKDRTWPDAVIQKAPAWLSTDLRDGNQALIEPMDLERKLRMFQQLVKIGFKEIEVGFPSASQIEFDFVRRLIEENLIPDDVTIQVLTQAREPLIRRTFEALRGARGAIVHLYNATAPIMRRVVLGMDEDAIVELAVDNARLFARLAAEQPDTRWTFQYSPEMFSGTELAFSKRVVDAVTAVWAPTPEHKCIVNLPSTVEHSTPNIFADMIEWMHRHLARRESIVLSVHPHNDRGTGTAAGEFALMAGADRLEGCLFGNGERTGNLDLVNVALNLYTQGVSPGLDFSDIDEIRRTVEHCNQLPVHPRHPYVGDLVYTSFSGSHQDAIKKAFAARRADDIWNVPYLPIDPKDLGRSYEAVIRVNSQSGKGGIAYLLETEYGVELPRRLQIEFSQVVQAVMDLDGKELTAKDLWQLFEREYALSAPAPANATTTELAGGSVRVTADVDWAGAVVPVQGQGNGPIDAFVNALNAATGRSVRVLDYHEHAIGAGAQAQAMAYMELRVDERHTVFGVGRDTNIVSASFKAIVSGLRRVAPEQTQETMERVAP*