ggKbase home page

scnpilot_p_inoc_scaffold_1589_curated_6

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 4375..5931

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 518.0
  • Bit_score: 990
  • Evalue 1.20e-285
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 515.0
  • Bit_score: 810
  • Evalue 2.90e-232
Lysine--tRNA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQT8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 518.0
  • Bit_score: 990
  • Evalue 8.40e-286

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGAGCCAAGCCAACACCCCCGACACCGCCGCCCCCGTGGCGCAAGACGAGAACCAGCTGATCGCCGAACGGCGCGAGAAGCTCAAGGCCCTGCGCGAGGGCCAGAAGCGGGGCGAGGGGGTGGCCTTCCCGAACGACCACAAGCCCACGGACAACGCCGCCGCGCTGTTCGCCGCCCATGGCGAGAGCAGCAAGGAAGCGCTGGAGGCCACGCCAGTGCGCGCCAGCGTGGCGGGCCGCATGATGCTCAAGCGCGTGATGGGCAAGGCCAGCTTCGCCACGCTGCAGGACGCCTCGCTGGGCCCCAGCGGCGGGCGCATCCAGATCTACCTGAACAACGACAGCGTGGGCGAGGCCCAGCACAACGCCTTCAAGCACTGGGACCTGGGCGACATCGTGGCCGCCGAGGGCACGCTGTTTCGCACCCGCACCGGCGAGCTGACCATTCACGCCGACAAGATCCGCCTGCTCACCAAGAGCCTGCGCCCGCTGCCCGACAAGTTCCACGGCGTGGCCGACCAGGAGATCAAGTACCGCCAGCGCTACGTGGACCTGATGACCGACGAGGGCGCGCGCCGCCGTTTCGTCACGCGCAGCCAGGCCGTCACGGCGCTGCGCCAGTTCATGGTGTCGCACGGCTTCCTGGAGGTCGAGACGCCGATGCTGCACCCCATCCCCGGCGGTGCCAACGCCAAGCCTTTCGTCACGCACCACAACGCGCTCGACCAGGAAATGTTCCTGCGCATCGCGCCCGAGCTGTACCTCAAGCGGCTGCTGGTGGGTGGCTTCGAGCGCGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGCATCTCGGTGCGCCACAACCCCGAGTTCACCATGATGGAGTTCTACGCGGCGTACTGGAACTACCGCGACCTCATGGACTTTTCGGAACAGCTCATCCGACACGTGGTGCGCACGGTGCGCGGCGAGGGCGAGGTGAGCTACCAGGGCCGCGCGGTCGACATCGACTCGCCCTTCGAGCGACTGACCATCCGCGACGCCATCGTCAAGTACACCGACGCGGGCGCGAACGTGGACAACGCCGACTGGCTGCTCGGCCAGCTGCGCAAGCTCGGCCTCAACGAGGAAAAGGACCAGCTCTCCAAGCGCAGCCTGGCCTCGCTGCAGGTGCTGTTCTTCGAGGAGAAGGTGGAGAGCGAGCTCTGGAACCCCACCTTCATCATGGAGCACCCGACCGAGATCTCGCCGCTGGCGCGCGCCAACGACGAGCGACCCGAGGTGACCGAGCGTTTCGAGCTCTACATCACCGGTCGCGAATTCGGCAACGCCTTCTCCGAGCTGAACGACGCCGAGGACCAGGCCGCGCGTTTCCACGCCCAGGTGGACGCCAAGGACGGCGGCGACGACGAGGCCATGCACTTCGACGCCGACTACATCCGCGCGCTCGAGTACGGGATGCCGCCCGCCGGCGGCTGCGGCATCGGCATCGACCGCTTGATGATGCTGCTGACCGACAGCCCCAGCATCCGCGACGTGATCCTGTTCCCCGCGCTGCGCCGCGAGAGCTGA
PROTEIN sequence
Length: 519
MSQANTPDTAAPVAQDENQLIAERREKLKALREGQKRGEGVAFPNDHKPTDNAAALFAAHGESSKEALEATPVRASVAGRMMLKRVMGKASFATLQDASLGPSGGRIQIYLNNDSVGEAQHNAFKHWDLGDIVAAEGTLFRTRTGELTIHADKIRLLTKSLRPLPDKFHGVADQEIKYRQRYVDLMTDEGARRRFVTRSQAVTALRQFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFSEQLIRHVVRTVRGEGEVSYQGRAVDIDSPFERLTIRDAIVKYTDAGANVDNADWLLGQLRKLGLNEEKDQLSKRSLASLQVLFFEEKVESELWNPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNAFSELNDAEDQAARFHAQVDAKDGGDDEAMHFDADYIRALEYGMPPAGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES*