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scnpilot_p_inoc_scaffold_4281_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2333..4357)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 643.0
  • Bit_score: 733
  • Evalue 5.80e-209
Lytic transglycosylase catalytic subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRE6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 674.0
  • Bit_score: 1261
  • Evalue 0.0
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:EIK91786.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 674.0
  • Bit_score: 1261
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2025
ATGCAGGGATTTCGCAAGCGCTGGATGGCGCGTTTCGCGGCCCGCCCCATTCCGGGGGCGCGGCTCATTATGGCGGCGCTGCTGCTGCCTTCCATGGCCTGGGCGCAGAACGCCGCGTCCGACCAGACCCTGCTCGCCATGAGCGAGGCCTACCGCCGCGGCCAGTCCGGCGAACTCACGCGCCTGCTGCCCAGCGCGCGCGGCCATGTGCTGGAGCCGCTGGCGCGCTACTGGGAAATGCGCGTGCGGCTGGACAGCGCGCCCGCCCCCGAGATCCGCGCCGCGCTCGACGCCATGGCCGGCACCTACTGGGAGGACCGGCTGCGCAACGACTGGCTGCTGCAGCTCGGCAAGGCGCGCGACTGGGCGCGCTTCGAGACCGAGCGCCCACTGTTCCGCATGAACGACGACCGCCAGGTCACCTGCTACACGGTCATGCTGGACGCCGCCGGCAGCCGGCTGCCGCCCGAGGTGGCGGCCGAGCGCGTGCGCGAGCTCTGGCTGGCACAGCGCGACGCCGAGGACGGCTGCGCCACCGCCGCGCAGGCCCTGCTGGCCAGCGGCCACCTGCGGCCCGCCGTGGCCTGGCAGCGCGCGCGGCTCATGATGGAAGTCGGCCGCGGCCGCGCGGCCAGCCAGGCCGTGGGCCTGGTGCGGCCCGAGGCCGTGCCCACGGTGGACGCCGTCGCGGCCAACCCGGCGAAATACCTCGACGACAAGATCACCGCGATCCGCCCGCGCACCAAGGAGCTGGTCACGCTGGCCATCATCCGCCTGGCCTCGCAGGACCCGGCGGCCGCGGCCAGCGAACTCGACAGCCTGAAGTGGCGCGCCCAGCTCACGGCCGAGGAGCGCGGCTGGCTCTGGGGCGTGATCGGCAAGCGCAGCGCGCAGCGCCTGCAGGCCGAGGCGCTGGGCTACTTCGCGCGCGGCGAGCTGCGCTTCATGACCGACGACCACCTGGCCTGGATGGCGCGCGCCGGCCTGCGCCTGGGCCGCTGGGACGCGGTGCGCGACGCCATCTACGCCATGAGCCCCGCACAGCGCGGCGAAACCGGCTGGACCTATTGGCGCGCGCGCACCATCGAGGCCCTGCAGGACCCCGACGCCGGCGTGGCGCGCGCCCAGGCGCGCGAGATCTACGAGACCATCGCCTCGCCGCGCGACTTCCACGGCATGCTGGCCATGGAGTCGCTGGGCCTGCCCATCGTGGCGCCCGCGCCGCCCGAGCCCCTGACGGCCGAGGAGCGCCGCGCCGCCGAACAGAACCCTGGCCTGCGCCGCGCGCTCGCCGCCATCCGCCTGGGCCTGCGCGGCGAAGGGGTGCGCGAGTGGAACTACCAGATCGCGCTGCACGCGCCCGGCGGCATGGGCGACCGCGAGCTGCTCGCCGCCGCCGACCTGGCCTGCCGCGAACAGCTGTGGGACCGCTGCATCAACACCAGCCAGCGCACCCGCGAGGCCATCGACATGCAGCAGCGCTTTCCCACGCCGCACCGCGAGCAGGTGGTGGCCCGCACGCGCGACATCGGCCTGGACCCGGCCTACGTGTATGGGCTGATCCGCCAGGAAAGCCGCTTCGTGGTGGAGGCACGCTCGCAGGTGGGCGCCTCGGGCCTGATGCAGGTGATGCCGGCCACCGCGCGCTGGACGGCCCGCAAGATCGGCCTGTCCAACTTCCAGCCGCAGCAGATCGGCGAGCGCGACACCAACATCCAGATCGGCACCGCCTACCTCAAGTTCGCGCTCGACGACTTCGAGGGCTCGATGCCGCTGGCCGCGGCCGCCTACAACGCCGGCCCCGGCCGTGCGCGCGCCTGGCGCAACGGCCCCGTGCTGCCCGGCGAGATCTGGGCCGAGAACATCCCCTTCGAGGAAACGCGCGACTACGTGCAGCGCGTGCTCACCAACACCGTCAACTACGCCGCGCTCATGAGCGGCGCGCCGCAGTCGCTGCGCCAGCGGCTGGGCACCGTCGGGCCGCGCAGCGTGGCGGCACCGGCGGAGAACACCGAGTTGCCCTAA
PROTEIN sequence
Length: 675
MQGFRKRWMARFAARPIPGARLIMAALLLPSMAWAQNAASDQTLLAMSEAYRRGQSGELTRLLPSARGHVLEPLARYWEMRVRLDSAPAPEIRAALDAMAGTYWEDRLRNDWLLQLGKARDWARFETERPLFRMNDDRQVTCYTVMLDAAGSRLPPEVAAERVRELWLAQRDAEDGCATAAQALLASGHLRPAVAWQRARLMMEVGRGRAASQAVGLVRPEAVPTVDAVAANPAKYLDDKITAIRPRTKELVTLAIIRLASQDPAAAASELDSLKWRAQLTAEERGWLWGVIGKRSAQRLQAEALGYFARGELRFMTDDHLAWMARAGLRLGRWDAVRDAIYAMSPAQRGETGWTYWRARTIEALQDPDAGVARAQAREIYETIASPRDFHGMLAMESLGLPIVAPAPPEPLTAEERRAAEQNPGLRRALAAIRLGLRGEGVREWNYQIALHAPGGMGDRELLAAADLACREQLWDRCINTSQRTREAIDMQQRFPTPHREQVVARTRDIGLDPAYVYGLIRQESRFVVEARSQVGASGLMQVMPATARWTARKIGLSNFQPQQIGERDTNIQIGTAYLKFALDDFEGSMPLAAAAYNAGPGRARAWRNGPVLPGEIWAENIPFEETRDYVQRVLTNTVNYAALMSGAPQSLRQRLGTVGPRSVAAPAENTELP*