ggKbase home page

scnpilot_p_inoc_scaffold_8195_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 6529..7908

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJE4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 459.0
  • Bit_score: 874
  • Evalue 3.50e-251
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 459.0
  • Bit_score: 874
  • Evalue 4.90e-251
sms; DNA repair protein; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 458.0
  • Bit_score: 787
  • Evalue 2.30e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGCCAAGGACAAGACGATCTACACCTGCGGCGAGTGCGGCGGCACCAGCCCGCGCTGGCTGGGCAAATGCCCGCACTGCGGCGCCTGGAACACGCTGGTGGAAGGCGTGGCCGAGGGCGGCGGCGCGCCGCCGAAGAACCGCTTCGCGGCGCTGGCCAAGACCAGCGAGGTGATGCCGCTGTCGCGCATCGAGGCCCGGGACGTGCAGCGCACGCCCACCGGCCACGAGGAGCTGGACCGCGTGCTGGGCGGTGGCATCGTCGAGGGCGGCGTGGTGCTGATCGGCGGCGACCCCGGCATCGGCAAGTCCACCCTGCTGCTGCAGGCCCTCGACAGCCTGCAGCGCGCCGGCCTGCCCACGCTCTACGTGACCGGCGAGGAAAGCGGCGCCCAGGTGGCGCTGCGCGCGCGCCGGCTCGGCATCGAGGGTTCGCAGGTGCAGGTGCTGGCCGAGATCCAGCTGGAAAAAGTCCTGGCCACGCTGGACGCCGAGAAGCCCGCCATCGCGGTGATCGACTCGATCCAGACCGTCTATTCCGACCAGCTCACCAGCGCCCCGGGCTCGGTGGCCCAGGTGCGCGAGTGCGCGGCCCACCTCACGCGCGCGGCCAAGGCCTCGGGCACGGCCATCGTGCTGGTGGGCCACGTGACCAAGGAAGGCGCGCTGGCCGGCCCGCGCGTGCTGGAGCACATGGTGGACACCGTGCTCTATTTCGAAGGCGATACGCACAGCAGCTTCCGGCTGATCCGCGCGATCAAGAACCGCTTCGGCGCGGTCAACGAGATCGGCGTGTTCGCCATGACCGAGAAAGGCCTCAAGGGCGTGAGCAACCCGAGCGCGATCTTTCTCTCGCAGCACGCCCAGCCGGTGCCGGGCAGCTGCGTGATGGTCACGCTGGAGGGCACGCGGCCGCTGCTGGTGGAGCTGCAGGCCCTGGTGGACAGCGGCGGCCCCAGCCCGCGCCGCCTGAGCGTGGGCCTGGAGCGCGACCGCCTGGCCATGCTGCTGGCCGTGCTGCACCGCCACGCGGGCGTGGCCTGCCTGGACCAGGACGTGTTCGTCAACGCCGTGGGGGGCGTGCGCATCAGCGAGCCCGCGGCCGACCTGGGCGTGATGCTGGCCATCACCAGCAGCCTGCGCGGCAAGCCGCTGCCCAAGGGCTTCCTGGCCTTCGGCGAGGTGGGCCTGGCCGGCGAGGTGCGGCCCGCGCCGCGCGGGCAGGAGCGCCTGAAGGAGGCGGCCAAGCTGGGCTTTTCCGTGGCGGTGGTCCCCAAGGCCAACCTGCCCAAGAAGAACGACAAGGCCTTCGACGGCCTCACCGTGCATGGGGTCGAGCGCATCGAAGAGGCGCTGGATCTGGTGCGCCGGCTGGAATGA
PROTEIN sequence
Length: 460
MAKDKTIYTCGECGGTSPRWLGKCPHCGAWNTLVEGVAEGGGAPPKNRFAALAKTSEVMPLSRIEARDVQRTPTGHEELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQALDSLQRAGLPTLYVTGEESGAQVALRARRLGIEGSQVQVLAEIQLEKVLATLDAEKPAIAVIDSIQTVYSDQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTVLYFEGDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHAQPVPGSCVMVTLEGTRPLLVELQALVDSGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACLDQDVFVNAVGGVRISEPAADLGVMLAITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQERLKEAAKLGFSVAVVPKANLPKKNDKAFDGLTVHGVERIEEALDLVRRLE*