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scnpilot_p_inoc_scaffold_713_curated_13

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 14681..15571

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7T7_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 295.0
  • Bit_score: 415
  • Evalue 3.80e-113
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 295.0
  • Bit_score: 415
  • Evalue 1.20e-113
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB32535.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 295.0
  • Bit_score: 415
  • Evalue 5.30e-113

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGCAGATCTTCGTGCGCGTCGTCGAGACCGGCAGCTTCAGCAAGGCGGCGGCGGCGCTGGGCACCACCCAGCCCACCGCCACCAAGGCCGTGGCCGAGGCCGAGGGGCGCCTGGGTGTTCGGCTGCTGCACCGAAGCACGCGCGGCGTCACGCCGACCGAGGCGGGCAGCCTCTACTACGAGCGCTGCAAGCTGATCACGCGCGACGTGGAAGAGGCAGAGAACATTGCCGCGCTGCTGCAGAAGGCGGCGACGGGCACGCTGCGCATCAGCGCCTCGGTGGCCTTCGGGCGGCGCGTGATGGCGCCGCTGGTGCTGCGCTACATGCGCGAGCAGCCGATGCTGCAGATCGACCTCAGCTTCGATGACCGCTACGTCAACCTCGTGGAGCAGGGGGTGGACCTGGCGGTCCGCATGGGCCGCCTCGCGGATTCCACGCTCGGAGCGAGCTACCTGGGCACCAATCCCTGGATGCTGGGCGCCGCCCCGGCCTACCTGTCGCGGCGCGGCCGGCCGCGCTCGCCGGGCGAGCTTGCCGCGCACGACTGCCTCATCTACAGCAGCGTGCAGGGCGATGCGCGCTGGCTGTTCCACGGCGCCTCGGGAGAGGACGAGTCCGTGCCCGTCAAGGGGCCGCTGCGCTCGAACAACCTGAGCGCGGTACTGGCCGCGTGCGAGGCGGGCTTCGGGCTCGCGGTCCTGCCGTGGTACGTGGCGCGCGATTCGGTGGCGGCGGGCCGTGTGGTTCCGCTGCTGGAGGGCCACGCCCTGCCGTCGCAGGAGATGCACGCCGTGTTTCCTTCGCCCAAGCTCGTGCCGCAGAAGGTCAAGTCCTTCATCGCCTGGCTTCAGGCGCAGCTCCAGGACGGCTGGTGGCAACGCGCGCCCTGA
PROTEIN sequence
Length: 297
MQIFVRVVETGSFSKAAAALGTTQPTATKAVAEAEGRLGVRLLHRSTRGVTPTEAGSLYYERCKLITRDVEEAENIAALLQKAATGTLRISASVAFGRRVMAPLVLRYMREQPMLQIDLSFDDRYVNLVEQGVDLAVRMGRLADSTLGASYLGTNPWMLGAAPAYLSRRGRPRSPGELAAHDCLIYSSVQGDARWLFHGASGEDESVPVKGPLRSNNLSAVLAACEAGFGLAVLPWYVARDSVAAGRVVPLLEGHALPSQEMHAVFPSPKLVPQKVKSFIAWLQAQLQDGWWQRAP*