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scnpilot_p_inoc_scaffold_713_curated_25

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(27925..28842)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51 similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 300.0
  • Bit_score: 253
  • Evalue 1.90e-64
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 301.0
  • Bit_score: 247
  • Evalue 3.30e-62
Putative transcriptional regulator of the LysR family (gstR) similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 291.0
  • Bit_score: 199
  • Evalue 1.80e-48

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGACGGCCAAACTCGATCGCCTGCAGCTCATCACCACCTTCCTGGCCGTGGCCGAGCGGCGCAGCCTGTCGGCCGCCGCGCGCGCGCTGGGCACCACGCAGCCCACCGTGAGCCGGCGTCTGCGCGACCTGGAACAGCTGCTCAACGCGCGCCTGGCCACGCGCTCCACGCACCGCTTCGACCTCACGGCCGAAGGCGAGGAACTGCAGCGCCGCGCCGTGGCCTGGGCCGACGCCTGGAACGAGTGGGAAGACGCGCTGAAGGTCAGCGCCGGCCTGCCCAAGGGCAAGCTGTCGCTGATCGGACCACACGCCTACGGGCACGCCTTCCTGATGGACGCCGTCCGCCTGTTCCGCGAACGCTACCCGCAGGTGGAGGTGGAGCTGCGGCTCACCGACCGGCCGGTGGACATCGTGGGCCAGGCCTGCGACTGCTGGATCCGCGTCGGCAGCAGCGCCGACCAGTCGCTGCACGTGCGACCCATCGGTCGCATGCGGCGCGTGCTCGTGGCCTCGACGGCCTTCGCGGCGCGGCACCGCGTCCGCACGCCGGAAGACCTGTCGTCCCTGCCCTTCGTGGGACTGATTCCCTACGTGATGGACCGCCTGCCCATGCACACGCAGGACCAGACCGAGCGCCGCACCGTGCCGATCCGCACCCCCTTCACCACCGACGGCCTGCTGGCCAGCTACCGCGCCATGCTCGAGGGCCTGGGCATCGCGGCGAGCGCGCGCTGGCTGTGCGGCCCGGACATCGCCAGCGGCCGGGTCAAGCGCATCTTGCCCAAGTGGGAGCTCGAGCCCATCGCCATCGAGGCGGTGTCCGTCGCCGGCCGCTTCCGGCCCGCCCGCATCAACGCCTTCATCGACGTGTTGTGCGAGGTGATGGCGGGCGTGGAAGGCTTCGATCCGGCCTGA
PROTEIN sequence
Length: 306
MTAKLDRLQLITTFLAVAERRSLSAAARALGTTQPTVSRRLRDLEQLLNARLATRSTHRFDLTAEGEELQRRAVAWADAWNEWEDALKVSAGLPKGKLSLIGPHAYGHAFLMDAVRLFRERYPQVEVELRLTDRPVDIVGQACDCWIRVGSSADQSLHVRPIGRMRRVLVASTAFAARHRVRTPEDLSSLPFVGLIPYVMDRLPMHTQDQTERRTVPIRTPFTTDGLLASYRAMLEGLGIAASARWLCGPDIASGRVKRILPKWELEPIAIEAVSVAGRFRPARINAFIDVLCEVMAGVEGFDPA*