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scnpilot_p_inoc_scaffold_2754_curated_14

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 11141..11518

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 126.0
  • Bit_score: 247
  • Evalue 5.70e-63
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 126.0
  • Bit_score: 247
  • Evalue 8.10e-63
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 126.0
  • Bit_score: 231
  • Evalue 1.30e-58

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGAACATTGAATTGGAAAACCACAAGCTCGAGAAGCGGCTGTGCCGCGAGGTCGGGCGCGCCATCGTCGACTACAACATGATCGAGGAAGGCGACCGCGTCATGGTCTGCCTCTCGGGCGGCAAGGACAGCTACGGCCTGCTCGACATCCTGCTGAAGCTGCAGCAGCGCGCGCCGGTGAAGTTCGAGCTGATCGCGGTCAACCTCGACCAGAAGCAGCCCGGCTTCCCCGAGCACGTGCTGCCCGAGTACCTGACGAAGCTGGGCGTGAAGTTCCACATCGAGAACCAGGACACCTACTCCATCGTCAAGCGCGTGATCCCCGAGGGCAAGACCCTGTGCAGCCTGTGCAGCCGGCTGCGCCGCGGCATCCTCTAC
PROTEIN sequence
Length: 126
MNIELENHKLEKRLCREVGRAIVDYNMIEEGDRVMVCLSGGKDSYGLLDILLKLQQRAPVKFELIAVNLDQKQPGFPEHVLPEYLTKLGVKFHIENQDTYSIVKRVIPEGKTLCSLCSRLRRGILY