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scnpilot_p_inoc_scaffold_6331_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(1..720)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSU1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 240.0
  • Bit_score: 437
  • Evalue 9.70e-120
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92281.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 240.0
  • Bit_score: 437
  • Evalue 1.40e-119
LysR family transcriptional regulator; K13794 LysR family transcriptional regulator, regulatory protein for tcuABC similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 245.0
  • Bit_score: 331
  • Evalue 2.40e-88

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGAACTGAGGCAACTGCGCTACTTCGTCCGCATCGTCGAGCTCGGCGCCATGAGCCGCGCGGCGGCGGAACTCGACATGGTCCAGTCCGCGCTGAGCCAGCAGATCAGCCGGCTGGAAAGCGAGCTCAGCACGCGTCTGCTGCAGCGCACGCCGCGCGGCGTGTTGCCCACCGAGGCCGGCATGGCCTTCTTCCGCGAGGCCAAGCTCACCCTGCGCCACGCCGAGCAGGCCGCGCGCGCCGCGCAGGCCGCGCGCCTGTCGGGCTCCGTCAGCGTGGGCCTGGCGCCCACCACGGCGGCCGTGCTGGGCCTGCCGCTGATGCAGGCCATGCGCGAGCGCTACCCCGACGTGCGCCTGCACCTGGTGGAGGGCATGTCCGGCCATCTCGCGGCCCAGCTCAAAGCGCGCGAGCTCGACCTCGCCGTGCTGTTCGATCCGCGCGCGGGACAAGGTGGCCCCGTGCCGGGGGACCGCTTGATGGACCGCCAGCCCCTGTTCACCGAGGACATCTTCCTCGTCACGCAGGCCAGGCGGCGGCGACGCAAGCGCCTGGCGCTCGCCGACCTCGGCGACGAGCCCCTGATCCTGCCCACGCACCCGCACGGCCTTCGCCTGACGCTCGACGCCGCCTTCGCGCGTGCCGGCATCCGCCCCCAGGTGGTGATGGAGGTGGACTCCTTGTCCATGGTGATGGCCGCCGTGGACGCCGGCCTGGGC
PROTEIN sequence
Length: 240
MELRQLRYFVRIVELGAMSRAAAELDMVQSALSQQISRLESELSTRLLQRTPRGVLPTEAGMAFFREAKLTLRHAEQAARAAQAARLSGSVSVGLAPTTAAVLGLPLMQAMRERYPDVRLHLVEGMSGHLAAQLKARELDLAVLFDPRAGQGGPVPGDRLMDRQPLFTEDIFLVTQARRRRRKRLALADLGDEPLILPTHPHGLRLTLDAAFARAGIRPQVVMEVDSLSMVMAAVDAGLG