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scnpilot_p_inoc_scaffold_2023_curated_13

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(13337..13660)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 107.0
  • Bit_score: 211
  • Evalue 3.90e-52
Integration host factor subunit beta {ECO:0000313|EMBL:EIK90847.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 107.0
  • Bit_score: 211
  • Evalue 5.50e-52
integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 1.40e-40

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGACCCGCAGCGATCTTGTCGAAGCCCTGGCCGCCCGGTTCGGCCAGCTCACCCACCGCGATGCCGAGTTCGCCGTCAAGGCGATCCTCGACGCCATGGGCGATGCCCTGGTGAAGGGCCACCGCATCGAGATCCGGGGCTTCGGCAGTTTCTCGGTCAATCGCCGCTCGCCTCGCATCGGACGCAACCCGCGTTCGGGCGAGAGCGTGATGATTCCCGAGAAGCGCGTGCCCCACTTCAAGCCCGGCAAGGCCTTGCGCGAGCAGGTCGACGAACGCACCGCCCTCATGCAGCAGCACGAGGACCAGCGACGCACCGGCTGA
PROTEIN sequence
Length: 108
MTRSDLVEALAARFGQLTHRDAEFAVKAILDAMGDALVKGHRIEIRGFGSFSVNRRSPRIGRNPRSGESVMIPEKRVPHFKPGKALREQVDERTALMQQHEDQRRTG*