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scnpilot_p_inoc_scaffold_1372_curated_17

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(14736..15308)

Top 3 Functional Annotations

Value Algorithm Source
Rna polymerase sigma factor {ECO:0000313|EMBL:EIK88819.1}; EC=2.7.7.- {ECO:0000313|EMBL:EIK88819.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 190.0
  • Bit_score: 345
  • Evalue 4.30e-92
Rna polymerase sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHX9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 190.0
  • Bit_score: 345
  • Evalue 3.10e-92
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 187.0
  • Bit_score: 291
  • Evalue 2.20e-76

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCCTTCTCCAACGTTCGAACAGGAAGTGGCCGCGTCGCGCGGCTACCTCATGAAGTTCGCGCGCCTGCAGCTGCGCAACGAGACCTGGGCCGAGGACGCGGTGTCCGAAACCGTGCTCGCGGCCATCGCCAAGCCGCAGGCCTTCGAGCGCCGCGCGCAGCTGCGGACCTGGCTCGTGGGCATCCTCAAGCACAAGATCGTCGACGCGCTGCGCCACCAGGGGCGCGAGGTGGCGCTGGGGCAGGGCGAGGACGATCGGGCCGATCCGCTGGATCACTTGCCTTTCGACGCCGGCGGGCACTTTGCCGAGCGCCCGGCGGATTGGGGCAATCCCGAACAGGACCTGGGCAGCCGCCAGTTCCTGAGCGTGCTGGAGGCCTGCACCGAGAAACTGCCCGCCGCGCAAGGGCGCCTGTTCCTGATGCGCGAGTGGCTGGAGATGAGCAGCGAGGAGATCTGTAAGGCGCTGTCGCTCACGCCGACCAACCTGTACGTCCAGTTGCACCGGGCCCGCCTGCGCCTGCGCGAGTGCCTCGAACTCAACTGGTTTGCCCGCCGAGACGCCGCATGA
PROTEIN sequence
Length: 191
MPSPTFEQEVAASRGYLMKFARLQLRNETWAEDAVSETVLAAIAKPQAFERRAQLRTWLVGILKHKIVDALRHQGREVALGQGEDDRADPLDHLPFDAGGHFAERPADWGNPEQDLGSRQFLSVLEACTEKLPAAQGRLFLMREWLEMSSEEICKALSLTPTNLYVQLHRARLRLRECLELNWFARRDAA*