ggKbase home page

scnpilot_p_inoc_scaffold_3786_curated_4

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(3467..5581)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK90091.1}; EC=1.1.1.35 {ECO:0000313|EMBL:EIK90091.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 704.0
  • Bit_score: 1339
  • Evalue 0.0
3-hydroxybutyryl-CoA epimerase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 704.0
  • Bit_score: 1161
  • Evalue 0.0
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLK1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 704.0
  • Bit_score: 1339
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2115
ATGACGGCTGAGTACAAGGTCCACGGAGACATCGCCCTCATCACGCTGAACAACCCGCCGGTCAACGGTCTGGGCCTGGCCACCCGCCTGGGCATCACGAACGGTCTGGAGCAGGCGCAGGCCGATCCGGCCGTCAAGGCCATCGTGCTCACCGGCGCCGGCAAGGCCTTTTCGGGCGGCGCGGACATCAAGGAGTTCGGCACGCCCAAGGCGCTGGCCGAACCCAACCTGCTGAGCGTGATCCTGGCGGTGGAGAACTGCAGCAAGCCCGTGGTGGCCGCGATCCACAGCGTGGCCATGGGCGGCGGGCTGGAGCTCTCGCTCGGCTGCCACTACCGCATCGCCGCACCGGGCGCCAACATCGCGCTGCCCGAGGTGAAGCTGGGCCTGATCCCTGGCGCCGGCGGCACGCAGCGCCTGCCGCGCGTGCTGGGCGTGGAGGCCGCGCTCAACATGATCGTGAGCGGCGAGCCCGTGAAGAGCGAGATGCTGGCCCAACTGCCCGGCCAGCGGCTGTTCGACAAGATGGCCAGCAGCCCCGAAACCCTGCTGGAAGAAGCCTTCGCCCTGGCCCGGGAAGTGGCCGCCAAGCACGCGGACGGCAGCCCGCTGCCCCTGGTGCGCCACCTGCCTTGCAAACACAAGGACGGCGACGCCTACTTCCAGTTCGCGCGCAACATGGTCAAGGGCATGGCCAAGCACTTCCCCGCACCCGCCAAGTGCGTGGACGCGGTCGAGGCCGCGACCAAGCAGAAGTTCGAGCAGGGCATGGCCACCGAACGGGAGATGTTCATCAACCTGATGTGGACGCCCGAGTGCCGTGCGCTGCGCCACCTCTTCATGGCCGAGCGCGCGGCCAGCAAGATCCCCGACGTGCCGGAAGACACGCCCCAGCGCAAGATCGACAAGGTGGCCGTCATCGGCGCCGGCACCATGGGCGGCGGCATCTCCATGAACTTCCTGAACGCGGGCATTCCCGTGACCCTCCTGGAGATGAAGCAGGAGGCCCTGGACCGCGGCGTCGGCGTGATGCGCGGCAACTACGAGGCCCAGGTGAAGAAGGGCAAGCTCAAGCAGGACAAGCTCGACCAGCGCATGGGCCTGCTCAAGACCACGGTGGACTACGCGGACATCCAGGACGCCGACCTCGTGATCGAGGCCGTGTTCGAGGACATCGGCGTGAAGGAGACCGTGTTCAAGAAGCTCGACGAGGTGATGAAGCCCGGCGCGATCCTGGCGTCCAACACCTCCACGCTGGACCTGAACAAGATCGCCGCCTTCACCCAACGCCCGCAGGACGTGGTGGGCTTGCACTTCTTCAGCCCCGCCAACGTGATGAAGCTGCTGGAGGTGGTGCGCGGCGACAAGACCGGCAAGGACGTGATGGCCACCGTGATGGCCGTCGCCAAGAAGATCAAGAAGACGGCGGTGGTGTCCGGCGTCTGCGACGGCTTCATCGGCAACCGCATGATCGAGCAGTACGGCCGCCAGGGTGGCTTCTTGCTCGATGAGGGCTGCACGCCCGCGCAGGTCGACCGCGCGATCGAGAAGTTCGGCTTCGCCATGGGGCCCTTCCGCATGGGCGACCTGGCGGGCAACGACATCGGTTGGGCGATCCGCAAGCGCCGCTACCAGGAAAAGCCCGACATGAAATACAGCAAGACCGCCGACCTGCTGTGCGAGAAGGGCCGCTTCGGCCAGAAGGTGGGCAAAGGCTGGTACGACTACAAGCCGGGCAAGCGCGACGCCATCCCGAACGCCGAGGTCGAGCAGATGATCGCCGAGCACCGCCAGGCGCTGGGCATCACGCCGCGCAAGATTTCCGACGAGGAGATCGTGCAGCGCCTGGTGTTCTCGCTGGTGAACGAGGCCGCGCACATCCTGGAAGAGGGCATCGCCAACAAGGCCAGCGACATCGACGTGGTCTACATCTTCGGCTACGGCTTCCCGGTGCACCGCGGCGGCCCGCTGAAGTACGCGGACGAGGTGGGCCTGTTCAACGTGATGCAGGCCATGAAGCGCTTCCAGAAGAACCCGCTCGACGACGCGGCCTTCTGGCAGCCCGCCCCGCTCATTCAGCGGCTGGTCGCCGAAGGCAAGAATTTCAACGGCTGA
PROTEIN sequence
Length: 705
MTAEYKVHGDIALITLNNPPVNGLGLATRLGITNGLEQAQADPAVKAIVLTGAGKAFSGGADIKEFGTPKALAEPNLLSVILAVENCSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGANIALPEVKLGLIPGAGGTQRLPRVLGVEAALNMIVSGEPVKSEMLAQLPGQRLFDKMASSPETLLEEAFALAREVAAKHADGSPLPLVRHLPCKHKDGDAYFQFARNMVKGMAKHFPAPAKCVDAVEAATKQKFEQGMATEREMFINLMWTPECRALRHLFMAERAASKIPDVPEDTPQRKIDKVAVIGAGTMGGGISMNFLNAGIPVTLLEMKQEALDRGVGVMRGNYEAQVKKGKLKQDKLDQRMGLLKTTVDYADIQDADLVIEAVFEDIGVKETVFKKLDEVMKPGAILASNTSTLDLNKIAAFTQRPQDVVGLHFFSPANVMKLLEVVRGDKTGKDVMATVMAVAKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDRAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYQEKPDMKYSKTADLLCEKGRFGQKVGKGWYDYKPGKRDAIPNAEVEQMIAEHRQALGITPRKISDEEIVQRLVFSLVNEAAHILEEGIANKASDIDVVYIFGYGFPVHRGGPLKYADEVGLFNVMQAMKRFQKNPLDDAAFWQPAPLIQRLVAEGKNFNG*