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scnpilot_p_inoc_scaffold_1701_curated_9

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 12247..12555

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMU1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 103.0
  • Bit_score: 192
  • Evalue 2.30e-46
Histone family protein nucleoid-structuring protein H-NS {ECO:0000313|EMBL:EIK90531.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 103.0
  • Bit_score: 192
  • Evalue 3.30e-46
stpA; transcriptional regulator StpA; K03746 DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 101.0
  • Bit_score: 106
  • Evalue 4.10e-21

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGCAACGTATTCCGAACTGATGGCCCAGGCGCAATCGCTGATGGCGCAGGCCGAGCAGGCCCGCAAGGACGAACTGTCCAATGTGATCGCCGACATCAAGGCCAAGATGAAGCAGTACGGCATCAGCGTGGCCGATCTGGGCGGCGCCAGCGCGGGCGGGCGCAAGGCGGCCAAGTCCAAGTCGGGCGCGGCGCCCAAGTACCGTGGCCCCAACGGCGAACTCTGGGCCGGCGGCCCGGGCCGCAAGCCGCAGTGGGTGCGCGACGCGCTCGCCGCTGGCAAGGATCTGGACGCGTACAAGATCTGA
PROTEIN sequence
Length: 103
MATYSELMAQAQSLMAQAEQARKDELSNVIADIKAKMKQYGISVADLGGASAGGRKAAKSKSGAAPKYRGPNGELWAGGPGRKPQWVRDALAAGKDLDAYKI*