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scnpilot_p_inoc_scaffold_4779_curated_11

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(7297..7803)

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPX4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 168.0
  • Bit_score: 317
  • Evalue 7.90e-84
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIK91264.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 168.0
  • Bit_score: 317
  • Evalue 1.10e-83
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 172.0
  • Bit_score: 292
  • Evalue 8.60e-77

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
CTGTCCATTCTCCTCATCGTGCCCATGGGCCTGCTCGCGGCCATGACGGGGGTGTGGCTGGACGGCGGGGACAACAACGTCTTCACGCAGATCGGGCTGATCGTGCTGGTGGGCCTGTCGGCGAAGAACGCCATCCTGATCGTCGAATTCGCGCGCGAACTGGAGTTCGCGGGCCGCACGCCGGTGCAGGCCGCCATCGAAGCCAGCCGCCTGCGCCTGCGACCCATCCTCATGACCTCGCTGGCCTTCGTCATGGGCGTGCTGCCCCTGGTGCTGGCCAGCGGCGCCGGCGCCGAGATGCGCTCGGCCATGGGCGTGGCGGTGTTCGCCGGAATGATCGGCGTGACCGCCTTTGGCCTCTTCCTCACGCCGGTGTTCTACGTGCTGCTGCGCCAGCTGACGGGCAACCGCCCCCTGCGGCAACACGGGGAGACACCCCACTTCAAGGGCTTGGCCAGCGGCGGCGCCGACGCCCGGCCCCTGCCCGCGGCCCCGGTCACGCATTGA
PROTEIN sequence
Length: 169
LSILLIVPMGLLAAMTGVWLDGGDNNVFTQIGLIVLVGLSAKNAILIVEFARELEFAGRTPVQAAIEASRLRLRPILMTSLAFVMGVLPLVLASGAGAEMRSAMGVAVFAGMIGVTAFGLFLTPVFYVLLRQLTGNRPLRQHGETPHFKGLASGGADARPLPAAPVTH*