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scnpilot_p_inoc_scaffold_9832_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1..477

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 158.0
  • Bit_score: 294
  • Evalue 9.50e-77
mraW; S-adenosyl-methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 155.0
  • Bit_score: 244
  • Evalue 1.90e-62
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIH6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 158.0
  • Bit_score: 294
  • Evalue 6.80e-77

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATTCGTGACTATGGCGAAGAACGGTTTGCTGCACCGATTGCAAAGGCGATTGATCGTCGCCGACAGGAACGGGGCCCTGTTCGAACCACCGGCGAGCTGGCCGAAATCGTGGCTGGCGCGGTCAAAACCCGCGAGCCGGGCAAGGACCCTGCAACGCGCACATTTCAGGCTCTTCGGATTTTCATCAACGCCGAGCTTGAAGAGCTGCAACAGGCGCTAGAAGCCAGCCTGTCCCTGCTCAAGCCCCAAGGTCGCCTCGTGGTCATCAGCTTCCACTCCCTGGAAGACCGCCCGGTCAAGCAGTTCATGGCGCGCCACTCGCGCGCCGTGGTGGACCGCCGCGCGCCCTTCGCCGAGCCCGCGCCCACGCGCCTGGCCGAGGTGCACCGCGTGATGCCGTCCGAAGCGGAGGTGCAGGGCAACCCGCGCGCGCGCAGCGCCGTCATGCGCGTGGCCACGCGAACGGGGGTGGCATGA
PROTEIN sequence
Length: 159
IRDYGEERFAAPIAKAIDRRRQERGPVRTTGELAEIVAGAVKTREPGKDPATRTFQALRIFINAELEELQQALEASLSLLKPQGRLVVISFHSLEDRPVKQFMARHSRAVVDRRAPFAEPAPTRLAEVHRVMPSEAEVQGNPRARSAVMRVATRTGVA*