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scnpilot_p_inoc_scaffold_6017_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(3553..4476)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRI2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 307.0
  • Bit_score: 562
  • Evalue 2.00e-157
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK91822.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 307.0
  • Bit_score: 562
  • Evalue 2.80e-157
nahR; HTH-type transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 298.0
  • Bit_score: 191
  • Evalue 3.80e-46

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGACGACCCCTCGTACGCCGAGGTGCGCGGCATCGACGTGACGATGCTGCGCGCCTTCGACGCGCTGATCCGCGAGCGCAGCGTGTCGCGCGCCGCGGCGCGGCTCTTCTTGAGCCAGCCCGCCGTCAGCGCCTGCCTCAAGCGCCTGCGCGTGGCCTTCGGCGACGAGCTGTTCGTGCGCACCCAGTACGGCGTCGAGCCCACGCCGCGCGCGCTCGCGCTGGCGCCTGGCGTGGAATCGGTGCTCTCGGATCTGCAGCGGCTCATGAGCCGCCAGCAGCCCTTCGACCCCGCCGCGTCCGACCGCATCCTGCGCGTGGCCGGCAGCGACCACCTCTGCCGCACCCTCATGCCCGGCCTGTGCCAGACGCTGGGCGCGCTGGGCTCGCGCATGCGCGTGTCCTGGTCGCTGGCCGACTACAGCAAGACCGCCGAGGAGCTGGCGCGCGGCGACATCGACCTGGCGCTGATCCCGCGCATCACGCAGGTGACCGGCGTGCAGACCTCCATCCTGTGCGAGGACTCCTACGTGGGCGTGGCGCGCCTGGGGCACCCGGTGCTGGCCAGCGGCCTCGACCTCGACGCCTTTTGCGCCTGGCGGCACGTGGTGCTGGGCCAGTCGCGCTCGGTGCTCGACGACACCATCGACAGCCAGCTCGCGCGCCTGGACCGCCGCCGCGTGGTGCAGGCCGGCGTCAACTCCTTCAGCCAGATGGTGGACCTGCTGGCCGAGACCGACCTGATCGCCGTCTTCCCGCAGCGCGTGGCGCGCCGCTACCTGCATGCGCTGGGTTCGCGGCCGCTGCCGCTGGAGCTGCCCGACTACCGCCTGCACGCCTGCTGGCACAAGCGCAGCGAGGCGGACGAGGCCGTGGTCTGGCTGCGCGGGCAGGTGATCGAGGCCATCGAGCGCACGCTCTGA
PROTEIN sequence
Length: 308
MDDPSYAEVRGIDVTMLRAFDALIRERSVSRAAARLFLSQPAVSACLKRLRVAFGDELFVRTQYGVEPTPRALALAPGVESVLSDLQRLMSRQQPFDPAASDRILRVAGSDHLCRTLMPGLCQTLGALGSRMRVSWSLADYSKTAEELARGDIDLALIPRITQVTGVQTSILCEDSYVGVARLGHPVLASGLDLDAFCAWRHVVLGQSRSVLDDTIDSQLARLDRRRVVQAGVNSFSQMVDLLAETDLIAVFPQRVARRYLHALGSRPLPLELPDYRLHACWHKRSEADEAVVWLRGQVIEAIERTL*