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scnpilot_p_inoc_scaffold_3320_curated_16

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(14391..14786)

Top 3 Functional Annotations

Value Algorithm Source
RNA recognition motif-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 262
  • Evalue 1.80e-67
RNA recognition motif-containing protein {ECO:0000313|EMBL:EIK91512.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 262
  • Evalue 2.50e-67
RNA-binding protein RNP-3 similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 206
  • Evalue 4.80e-51

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGGCAACAAACTTTATGTCGGCAACCTGCCGTACACGGTGCGCGACGAAGACCTGCAACAGGCCTTCTCGGCTTACGGTGCTGTCAACAGCGCCAAGGTCATGATGGAGCGCGAGACCGGCCGCTCCAAGGGCTTCGGCTTTGTCGAGATGGGCAGCGACGCTGAGGCGCAGTCGGCCATTCAGGGCATGAACGGCCAGTCGCTCGGCGGCCGCAGCCTGGTGGTGAACGAAGCGCGCCCGATGGAGCCGCGTCCCCCGCGCAGCGGTGGCGGCGGCTTCGGCGGCGGCCGTCGCGAAGGCGGCTTCGGTGGTGGCGGCCAGGACGGCGGCTTCCGCAGCCCCTACGGCGGTGGTGGTCGTCGCGACGGCGGCGGTGGCCGCGGCGGCTACTGA
PROTEIN sequence
Length: 132
MGNKLYVGNLPYTVRDEDLQQAFSAYGAVNSAKVMMERETGRSKGFGFVEMGSDAEAQSAIQGMNGQSLGGRSLVVNEARPMEPRPPRSGGGGFGGGRREGGFGGGGQDGGFRSPYGGGGRRDGGGGRGGY*