ggKbase home page

scnpilot_p_inoc_scaffold_1146_curated_28

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 25183..25872

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 229.0
  • Bit_score: 404
  • Evalue 9.40e-110
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 233.0
  • Bit_score: 308
  • Evalue 2.10e-81
Uracil-DNA glycosylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGG5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 229.0
  • Bit_score: 404
  • Evalue 6.70e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAGGCTGCACAACGCCGACTTCGCCCACTGGCCGGTCGCGCCCGGCTGGGCGCCCGTGGTGGACGCCTTCGCCGCCTCGCCGGCCGGCGAGGCGCTCTCGGCCTTTCTGCGCGCGCGGCTGGCCGCCGGCGCCACCATCTACCCGCCTGAGCCGCTGCGCGCGCTCGCGTTTACCCCGCCCGATGCGGTGCGCGTGGTGATCTTGGGGCAGGACCCATACCACGGCCCGGGCCAGGCGGAGGGCCTGGCCTTTTCTGTCGCCCCGGGCGTGAAATGGCCGCCGAGCCTGCGCAATATCTTCCTGGAGCGCCAGCACGACCTGGGCCTGCCGCCGCCCCTGAACGGCTCCCTGGTCGGCTGGGCCGAGCAAGGTGTGCTGCTGCTCAACACCAGCCTAACGGTCGAGGACGGTGCTCCAGCCAGCCATGCTGGTCGCGGTTGGGAAGTGCTCACTGACGCCATAATCCGCCACGTGGGGGCATCAATGGACCCGAAGGCCTTCTTGTTGTGGGGAGGGCACGCCCAGAAGAAAGCGGCCTTGATCGATGCCCGGCACCACCTGCTGCAGGCCAACCACCCGTCACCCTTGTCGGCCCGGCGCGGTCCGGTGCCTTTTCTGGGGTGCGGGCATTTCGGCGCCGTCAACGCCTGGCTGGCCAGCCAGGGCGCCGCGCCGATCCAGTGGTGA
PROTEIN sequence
Length: 230
MRLHNADFAHWPVAPGWAPVVDAFAASPAGEALSAFLRARLAAGATIYPPEPLRALAFTPPDAVRVVILGQDPYHGPGQAEGLAFSVAPGVKWPPSLRNIFLERQHDLGLPPPLNGSLVGWAEQGVLLLNTSLTVEDGAPASHAGRGWEVLTDAIIRHVGASMDPKAFLLWGGHAQKKAALIDARHHLLQANHPSPLSARRGPVPFLGCGHFGAVNAWLASQGAAPIQW*