ggKbase home page

scnpilot_p_inoc_scaffold_15132_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2..895

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 297.0
  • Bit_score: 510
  • Evalue 2.10e-141
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 291.0
  • Bit_score: 312
  • Evalue 1.40e-82
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIH2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 297.0
  • Bit_score: 510
  • Evalue 1.50e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
CCCACGGTGGCCCTGGTGAACAACGCGCAGCGCGAGCACCAGGAGTTCATGAGCTCGGTGGAGGCCGTGGCGCGCGAGAACGGCGCCGTCATCGCGGCGCTCGGCGCCGATGGCGTGGCCGTGTTTCCCAGCGACGACGTGCACACCCGCGTCTGGCAGGCGCTGGCCGGCGCGCGGCGCAGCCTCACGTTCAGCGACACCGACCCCGAGGCCACCGTGCGCGCGCACAGCGCGGAGTGGCGCGACGGCGCCTGGGCGCTGCACATCGCCTCGCCGCTGGGCGATGCCGAGGTGCGGCTGCGCATCGCGGGCCGGCACAACGTGCGCAACGCGCTCGCGGCCGCGGCCTGCGCGGTGGCCGCCGGTGTGCCGCTGGACGCCATCGCGCGCGGGCTGGAGGCCTTCGAGCCGGTGGGCGGCCGCTCGCGCGCCATCACCGTCACCGTGGGTGGCCGCGTGCTCACGCTGATCGACGACAGCTACAACGCCAACCCCGATTCCGTGCGCGCCGCGATCGATGTGCTGGCCTCGCTGCCCGCGCCGCACCTGCTGGTGCTGGGCGACATGGGCGAGGTCGGTGACCAGGGCCTGGCCTTCCACCTGGAGGTGCTGCGCCACGCCTTCGCGCGCGGCATCGACGAGGTGCGCGTGAGCGGCACGGCCATGTGCGAGGCCGCCGAGGCCCTGCGCGCGGCCGGCGAGCCCGCGCCGCGTTGCGTCGCCGAGGTGGACGCGCTGGCCACCGACGTGGCCGCCGAGGTCGCCACCGGGGTGGTGGCCAGCGTGCTCGTCAAGGGCTCGCGCTTCATGCGCATGGAACGCGTGGTGCGGGCCGTGCGCGCGCTCGACCCGATGCAGGCCGACAACCACAAGGATTCTTCCCATGCTGCCTAG
PROTEIN sequence
Length: 298
PTVALVNNAQREHQEFMSSVEAVARENGAVIAALGADGVAVFPSDDVHTRVWQALAGARRSLTFSDTDPEATVRAHSAEWRDGAWALHIASPLGDAEVRLRIAGRHNVRNALAAAACAVAAGVPLDAIARGLEAFEPVGGRSRAITVTVGGRVLTLIDDSYNANPDSVRAAIDVLASLPAPHLLVLGDMGEVGDQGLAFHLEVLRHAFARGIDEVRVSGTAMCEAAEALRAAGEPAPRCVAEVDALATDVAAEVATGVVASVLVKGSRFMRMERVVRAVRALDPMQADNHKDSSHAA*