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scnpilot_p_inoc_scaffold_13006_curated_2

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(202..1368)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJQ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 388.0
  • Bit_score: 708
  • Evalue 3.70e-201
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK89444.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 388.0
  • Bit_score: 708
  • Evalue 5.20e-201
substrate-binding periplasmic abc transporter protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 380.0
  • Bit_score: 387
  • Evalue 5.90e-105

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCATTCCCTTTCCAGAAAGCCCTTGGTGGCGCGCTCGTCGCCTTGGGTCTGGCGGCCGCACCCGCCGCCTTCGCCCAGGACACCGTGCGTGTCGGCGTCATCGCCGAGATGTCCGGCCCCTTCGCCGAATTCGGCAAGCAGATGCAGGCCGGCATACGGGCCTACCAGAAGATGCACGGCGACAGCGTGGCCGGCAAGCGCGTGGAGGTGGTGATCAAGGACGTGGGCGGGCCCAACCCCGACGCGGCCAAGCGCATCGCCACCGAACTGGTGGTGCGCGAGAAGGTGAACGTGCTCGCGGGCTTCGGCTTCACGCCGAACGCGCTGGCGGTGGCGCCCATCGCCACCCAGGCCAAGGTGCCCATGATCGTCATGAACGCGGCCGCCGGCGGGCTCACCGCCAAGTCGCCCTACATGGTGCGCACCTCCTTCCACTACCCGGAGACCGTGCCGCCGATCGCGCAGTGGGCCATCCAGCAGGGCGCGAAGAAGGCCTATGTGATCGTGGCCGACTACTCGCCGGGCCACGACGCCGAGGCGGCCTTCATCGCGGCCTTCAAGAAGGCCGGCGGCGAGATCGTGGGCAGCGTGCGCACGCCGCTCATGACGCTGGACTTCGCGCCCTACATGCAGCGCGTGAAGGACGCCCGGCCCGATGTGCTGTTCTCCTTCGTCAACGGCGGCGACGTGGCGCCGGCCTTCATCAAGGAGTACCGCGACAAGGGCCTGCCCGAGGCCGGCATCCAGCTCATCGGCACCGGCGACATCGTCGACGAGGCCCTGGTCGAGGCGATCGGCGAGCGCGGCGTGGGCATCACCACCGTGTACCCCTATTCCATGCACCACAAGTCGGCGCTGAACGAGCGCTTCGTGCGCGAGTTCAAGGCCCAGCGCGATGCGAAGTCGCGCCCCACCATCATGGGCGTGGCCGCCTACGACGGCATGGCCGCGCTGTACGCGGCGCTGGCCAAGACCGGCGGCAAGGCCGACGGGCCGACGCTGATCGCCGCGCTCGCCGGGCTGAAGATCGACAGCCCGCGCGGCAGCCTGACCATCGACAAGAACAGCCGCGACGTGGTGCACGACCAGTACATCCGCCGCTTCGAGAAGCAGGACGGCGCCTACTACAACGTCGAGTTCGAAACCTTCAAGGCGGCGCCCTGA
PROTEIN sequence
Length: 389
MPFPFQKALGGALVALGLAAAPAAFAQDTVRVGVIAEMSGPFAEFGKQMQAGIRAYQKMHGDSVAGKRVEVVIKDVGGPNPDAAKRIATELVVREKVNVLAGFGFTPNALAVAPIATQAKVPMIVMNAAAGGLTAKSPYMVRTSFHYPETVPPIAQWAIQQGAKKAYVIVADYSPGHDAEAAFIAAFKKAGGEIVGSVRTPLMTLDFAPYMQRVKDARPDVLFSFVNGGDVAPAFIKEYRDKGLPEAGIQLIGTGDIVDEALVEAIGERGVGITTVYPYSMHHKSALNERFVREFKAQRDAKSRPTIMGVAAYDGMAALYAALAKTGGKADGPTLIAALAGLKIDSPRGSLTIDKNSRDVVHDQYIRRFEKQDGAYYNVEFETFKAAP*