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scnpilot_p_inoc_scaffold_9276_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(1950..2882)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 308.0
  • Bit_score: 361
  • Evalue 2.80e-97
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 308.0
  • Bit_score: 573
  • Evalue 1.10e-160
Pseudouridine synthase {ECO:0000313|EMBL:EIK89798.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 308.0
  • Bit_score: 573
  • Evalue 1.60e-160

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCGCACCGCCCCAAGAACCCCCTGATTCCCACGCGCGAGGGCGTGTCGCCCAGCTGCGTGGCCATTCCCTTCACCCAACCGGCGCCCTGGGCCTCGGTGCTGCAGTTCCTGAGCGAGCGCCTGCCGGTGATCGCCCCCGGCGAATGGGCGCGGCGCCTGGCGCGCGGCGAGGTGCTGGACGACCACGGCCAGGCCCTGGCGCCCGAAGCCCCCTGCGAGCCCGGCGCCCGGCTCTACTACTGGCGCCATGTCGAGGACGAAGCGGAGATTCCCTTCGAGCCCCAGATCCTGTTCCACGACGAGCACCTGCTGGTGGCCGACAAGCCGCACTTCATGCCCGTCACGCCCAGCGGGCGCTATGTGCGGCACAGCCTGATGGTGCGGCTCAAGCAGCGCACAGGCCTCGACTCGCTCAACCCCATCCACCGCATCGACCGCGAAACCGCCGGCCTGGTGGTGTTCAACCTCCGGCCGCAGGACCGCAACGCCTACCACGCGCTGTTCCGCGAGCGCGCGGTCGACAAGGCCTACGAAGCCATCGCGCCGCACGACCCCACGCTCGCGCTGCCCCTCACCCGCCGCAGCCGCATCGAAGAGGACGTGGAGGCCTTCTTCCGCATGGTGGAGGCCGAGGGCGAGCCCAACAGCGAGACGCGCGTCGAGCGCCTGGAGGTGCGCGGCGCCTGGGCCCGCTATGGCCTGGCACCGCTCACCGGCAAGCGCCACCAGCTGCGCGTGCACCTCGACGCCCTGGGCCTGCCCATTGCGGGCGACCAGTTCTACCCGCGCGTGCGGCGCGGCCCCGACGGGGTCGAAGATTTCACCGAACCCTTGCGGCTGCTGGCGAGCGCCATCGCTTTCACCGACCCGGTGACGGGCCAGGCCCGGCGCTTCGAGAGCGCGCGCACGCTGGACTGGCCCTTGCCCTGA
PROTEIN sequence
Length: 311
MAHRPKNPLIPTREGVSPSCVAIPFTQPAPWASVLQFLSERLPVIAPGEWARRLARGEVLDDHGQALAPEAPCEPGARLYYWRHVEDEAEIPFEPQILFHDEHLLVADKPHFMPVTPSGRYVRHSLMVRLKQRTGLDSLNPIHRIDRETAGLVVFNLRPQDRNAYHALFRERAVDKAYEAIAPHDPTLALPLTRRSRIEEDVEAFFRMVEAEGEPNSETRVERLEVRGAWARYGLAPLTGKRHQLRVHLDALGLPIAGDQFYPRVRRGPDGVEDFTEPLRLLASAIAFTDPVTGQARRFESARTLDWPLP*