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scnpilot_p_inoc_scaffold_1881_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2586..3266

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator protein copR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSX0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 225.0
  • Bit_score: 378
  • Evalue 6.60e-102
Transcriptional activator protein copR {ECO:0000313|EMBL:EIK92310.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 225.0
  • Bit_score: 378
  • Evalue 9.30e-102
two component heavy metal response transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 226.0
  • Bit_score: 340
  • Evalue 4.80e-91

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGAAGATCCTCATCATCGAAGACGAAGCCCACACGGGCGAATACCTCAAGCAAGGGCTGAGGGAGGCTGGATACTTCTGTGAGTTGGCCCGCAACGGTGTCGACGGATTGCACGAGGCCACCGAGGGCGACTACGGCCTCGTGATCCTGGATGTCATGTTGCCAAGCATCGACGGTTGGTCTGTGCTGAGCTCTTTGCGGCGCAAGAAGAGCCAGTTGCCGGTGCTGTACCTGACCGCCCGAGACAGCGTGGAGGATCGCGTCAAAGGCCTGGAGCTGGGCGCCGACGATTACCTGATCAAACCGTTTTCTTTCTCCGAGTTGCTTGCCCGCATCAAGACGCTGCTAAGGCGTGGCGGCCAAATTCAAGATACGACGTCCTTGCAGATCGCAGACTTGCAGTTGGACCTTGTCCGTCGCCGCGTCACGCGGTCAGGTCGGCGCGTAGACCTGACCGCCAAGGAGTTCGGGCTACTGGAGCTCTTCATGCGACGCCGCGGTGAGGTCCTTCCTCGGACGCTGATTGCGTCGCTGGTGTGGGACATCAATTTCGACAGCGACAGCAATGTGATCGACGTGGCGGTGCGGCGACTGCGCGCCAAGATCGACGATGGCTTCGACACCAAGCTCCTGCAGACGGTGCGAGGCATGGGCTACGTTCTCGACGAACCCGATCACTGA
PROTEIN sequence
Length: 227
VKILIIEDEAHTGEYLKQGLREAGYFCELARNGVDGLHEATEGDYGLVILDVMLPSIDGWSVLSSLRRKKSQLPVLYLTARDSVEDRVKGLELGADDYLIKPFSFSELLARIKTLLRRGGQIQDTTSLQIADLQLDLVRRRVTRSGRRVDLTAKEFGLLELFMRRRGEVLPRTLIASLVWDINFDSDSNVIDVAVRRLRAKIDDGFDTKLLQTVRGMGYVLDEPDH*