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scnpilot_p_inoc_scaffold_2426_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2474..3337)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor jumonji jmjc domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTP2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 287.0
  • Bit_score: 548
  • Evalue 3.60e-153
Transcription factor jumonji jmjc domain-containing protein {ECO:0000313|EMBL:EIK92582.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 287.0
  • Bit_score: 548
  • Evalue 5.10e-153
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 279.0
  • Bit_score: 307
  • Evalue 4.40e-81

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCTGCGCTGCTTTGATGAGGGCGTCGACGCTTCTTTGCTCGACCGGGGTTCGTTTGTCTGCGGCCACCGGCTGATGGGGCATCCCGCCCTGTCCATGGAGAACCTGGCCAAGGTCATTCCGCGCTTGCCCCAGGGGCAGGTGATGTTCGCCACCCGGCGCCTGGACACCGGGGACAACTTCGAGAAGACCTTCCGCCAGAAGCCGCTGGACCGCTCGATCGAGGAAACCATCGAAACCATCCGCGAGTCCGACGCCTACATCATGGTGAACTCGCCGCAGGCGGACCCCAGCTTCGCCGAGCTCTACCAGGACCTGATCCACGACGTCGAGTCCCTCATGTGGGAACGCGGCGTGGGCGACAAGGCGATCTCGCCCAAGCTCTACCTGTTCATCGCCTCGCCCAACAGCGTGACCCCGTTCCACATCGACCGCTACTCCACCTTCCTGCTGCAGTTTCGCGGCAGCAAGTGGGTCACCGTGTCCGATCCCTGGGATGATCGCGTGGTGACCTCGCCCGACCGCGAAAACTACGTTTCCTACGTGAGCACCCAGCTGCCCTGGACACCCGAGAAGGACGGCATCAGCACACGCTACTGGTTCGAGCCCGGGCAGGCGCTGCACATCCCCTTCGTGGCCGGCCACCACGTGCACAACGGCGCCGACGATGTGTCCATCTCCATGTCCATCATCTTCAACACGCCGCAGACCACGGATTGGCGCGACGCGCTCAACTTCAACCAGCGCGCGCGCAAGGTGCTCAAGCGCGTCGGCCTGGGGCCGGGCCCGGTGGGCGTGAACCCCGGCCGCGACGCCATGAAGGCCAAGGCCTGGCGCACCTGGGCCGGTTGGCGCGGGTACTAG
PROTEIN sequence
Length: 288
MLRCFDEGVDASLLDRGSFVCGHRLMGHPALSMENLAKVIPRLPQGQVMFATRRLDTGDNFEKTFRQKPLDRSIEETIETIRESDAYIMVNSPQADPSFAELYQDLIHDVESLMWERGVGDKAISPKLYLFIASPNSVTPFHIDRYSTFLLQFRGSKWVTVSDPWDDRVVTSPDRENYVSYVSTQLPWTPEKDGISTRYWFEPGQALHIPFVAGHHVHNGADDVSISMSIIFNTPQTTDWRDALNFNQRARKVLKRVGLGPGPVGVNPGRDAMKAKAWRTWAGWRGY*