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scnpilot_p_inoc_scaffold_3823_curated_9

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(7900..9048)

Top 3 Functional Annotations

Value Algorithm Source
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 405.0
  • Bit_score: 219
  • Evalue 1.60e-54
MnmC protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKA4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 373.0
  • Bit_score: 618
  • Evalue 3.80e-174
MnmC protein {ECO:0000313|EMBL:EIK89644.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 373.0
  • Bit_score: 618
  • Evalue 5.30e-174

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
GGGCCTCTTGCTTTGCGCATGCCAGCCCCTGACGAGACGCGCCGAGCGCTGGTGATCGGCGCCGGCCTGGCGGGCGCGGCGGTCACGGCCGCGCTGTGCCGGCGCGGTTGGCGGGTCACGCTGCTCGACGCCGCGGAGGGCCCGGCCCGCGCGGCCTCGGCCCTGCCGGTGGGCGTGCTGAGCCCGCACCTCACGCGCCAGCCCACACCGATGTCGCGCCTCACGGCCCTGGGCGTGCCCATCGCGCGGGCCGAGCTGGAGCGCCTGGTGGCCCCGGGCGCCGGCTGGCAGGCGGCGACGATCGACAACCGCGGCGCCCACGCCCCCGGCCAGCAGCCCGCCGCGCTGGTGCGCCCGGGCGCCTTGGTGCTGGCCTGGCTGGCCGAGGCCGGCGAGCGGCTGGACACCCGCTGGAATGCGCCCGTGGCGGGCCTGTCGCGCGGGACCGGCCAGTGGCAGGCGCTGGACCCCGCGGGCCGGACCATCGCCGCCGCGCCGCACGCCGTGATCGCCGCCGCACTGGGCAGCCGCGATCTCGCGCCCGAGGCCGGCGGCGCCTGGCCGCTGGGCCCGGTGTTGGGCCAGATGAGCCTGGGCGCGCTGGACGGCGCGCCGCTGAGCGAGCGGCCGCAGCGCGACGACGGCGTCTTCGTGCCGGAGTACCGCGACAGCGGGCTAGCTCCGCGCTGGCCGGCGGCGATCTGGGCCATGGGCTCGACCTATGCGCGCGGCCGCACCGACACCGCCCTGAGCGATGCCGCCCACCGCGACAACGCCGCCCGGCTGCGCGCCCTGGCACCCGCCGCCGCCGACCGGCTGGAGGACGGGCTCGCGCAAGGCCGTCTGCTGGGCTGGGCCGGCGTGCGCTGCGCCTCCATGGACCGACTGCCCCTGGTGGGCGCCGCGCCCGACCCGGCGGCCTGGGCCGCGCGCGACAGCGCGGGCCACGCGGCATCGGCCGTGCCCCGACTGCCCGGGCTTTGGTTGCTCACGGCCCTGGGTTCGCGCGGGCTGTCGCTGGCCGCGGCCTGCGGCCAGTGGCTGGCGGCCGAGATGGACGGCGAAGCGCCGGGCCTCGACGCCGAACTGCGCACCGCGATCGACCCCGCGCGCTTTGCCTGGCGGCGCGCGCGGCGCACCCGCGGCTGA
PROTEIN sequence
Length: 383
GPLALRMPAPDETRRALVIGAGLAGAAVTAALCRRGWRVTLLDAAEGPARAASALPVGVLSPHLTRQPTPMSRLTALGVPIARAELERLVAPGAGWQAATIDNRGAHAPGQQPAALVRPGALVLAWLAEAGERLDTRWNAPVAGLSRGTGQWQALDPAGRTIAAAPHAVIAAALGSRDLAPEAGGAWPLGPVLGQMSLGALDGAPLSERPQRDDGVFVPEYRDSGLAPRWPAAIWAMGSTYARGRTDTALSDAAHRDNAARLRALAPAAADRLEDGLAQGRLLGWAGVRCASMDRLPLVGAAPDPAAWAARDSAGHAASAVPRLPGLWLLTALGSRGLSLAAACGQWLAAEMDGEAPGLDAELRTAIDPARFAWRRARRTRG*