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scnpilot_p_inoc_scaffold_3955_curated_9

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 6417..6848

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRS3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 143.0
  • Bit_score: 249
  • Evalue 2.30e-63
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 143.0
  • Bit_score: 249
  • Evalue 3.20e-63
large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 143.0
  • Bit_score: 236
  • Evalue 6.20e-60

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGGCATGATGCAGGAGTTCAAGGAATTCGCCGTCAAGGGCAATGTCATCGATCTGGCCGTGGGCGTGATCATCGGCGGCGCCTTCGGCAAGATCGTCGGCTCGCTGGTGGACGACGTGATCATGCCGGTGGTGGGCCTGGTGTTCGGCAAGCTTGACTTCAGCAACCTGTTCCTGGTGCTGGGCACGGCACCGGAGGGCACGGCCCGCACCCTGGCGGCCATGAAACAGGCCGGCGTGCCGGTGCTGGCCTATGGCAGCTTCATCACCGTGGCCATCAACTTCTTCATCCTGGCGTTCATCATTTTCCTGATGATCAAGCAGGTCAACCGCCTCAAGCGCGAGACCCCGCCGGCCCCCCCGGCACCGCCCGCCGCGCCGCCCGAGGACATCGTCCTGCTGCGCGAGATCCGCGACAGCCTCAAGAAGTAA
PROTEIN sequence
Length: 144
MGMMQEFKEFAVKGNVIDLAVGVIIGGAFGKIVGSLVDDVIMPVVGLVFGKLDFSNLFLVLGTAPEGTARTLAAMKQAGVPVLAYGSFITVAINFFILAFIIFLMIKQVNRLKRETPPAPPAPPAAPPEDIVLLREIRDSLKK*