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scnpilot_p_inoc_scaffold_2600_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(11976..12452)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP23_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 158.0
  • Bit_score: 296
  • Evalue 1.40e-77
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 158.0
  • Bit_score: 296
  • Evalue 1.90e-77
transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 157.0
  • Bit_score: 279
  • Evalue 9.20e-73

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCCACCATCCCCATCACCAAGCGCGGCGCCGAAAAGCTCAAGGAAGAGCTGCACCGCCTCAAGACCGTCGACCGCCCCGCGGTCATCAGCGCCATCGCCGAGGCGCGCGCTCAGGGCGACCTGAGCGAGAACGCCGAGTACGACGCCGCCAAGGACCGCCAGGGCTTCATCGAAGGCCGCATCGCCGAGATCGAGGGCAAGCTGTCGACGGCGCAGATCATCGACCCCTCGGCCCTGAACGCGGGCGGCAAGGTGGTGTTCGGCGCCACCGTGGAACTCGAGGACGAGGACAGCGGCTCGGCCGTCACGTACCAGATCGTGGGCGAGGACGAGGCCGACCTGAAGGAAGGCCTGATCAACATCGGCAGCCCGATCGCGCGCGCGCTGATCGGCAAGGAAGAGGGCGACACCGCCGAGGTGCAGGCGCCCGGCGGTTTGCGCCGCTACGAAATCGTGGCCGTGCGCTACGCTTGA
PROTEIN sequence
Length: 159
MATIPITKRGAEKLKEELHRLKTVDRPAVISAIAEARAQGDLSENAEYDAAKDRQGFIEGRIAEIEGKLSTAQIIDPSALNAGGKVVFGATVELEDEDSGSAVTYQIVGEDEADLKEGLINIGSPIARALIGKEEGDTAEVQAPGGLRRYEIVAVRYA*