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scnpilot_p_inoc_scaffold_2800_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1544..2053

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter family protein, DctQ subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSB1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 169.0
  • Bit_score: 305
  • Evalue 3.10e-80
TRAP dicarboxylate transporter family protein, DctQ subunit {ECO:0000313|EMBL:EIK92101.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 169.0
  • Bit_score: 305
  • Evalue 4.40e-80
dctQ-5; tripartite ATP-independent periplasmic transporter DctQ similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 147.0
  • Bit_score: 96
  • Evalue 1.20e-17

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCTCACCGTCCTGGATCGCGCGCTGCGCTGGTCGACCGGCCTCATGGCCGCGATGGCCTTGTTCTCCATCATGCTGCTCACGCTCGTCGACGTGACGGGCCGCAAGTTCTTCAGCCACTCGGTGCCCGGCGGGCTCGAGGTCACCGAGATCCTGATGGTGATCGTGATCTTCGGCGCGCTGCCCTTGGTCTCCTGGCGCGGCGAGCACGTGGTCTTCGACTCGCTGGACGCCTTCATTCCCAGTGGCCTGCGGCGCATCCAGCAGCGCGTGGTGCACCTGTTCTGCGCCATTGCCTTCGCCTGGATGGCGCGCCTGATGCTGCTGCGCGCCGACCGCTTTCTCGACTACGGCGACATCACGGTCCACCTGCAGCTGCCCATGGCGCCGGTGGCCTGGATGATGGCGCTCTTCCTGTTCGTGACCGCTCTGGTGCACCTGGTCTTCGTCTTCTTCCGTCCTCCCGAGCCCGCTTTCCACGGCGCGGCCCAGCCGGGAGACGCCGCATGA
PROTEIN sequence
Length: 170
MLTVLDRALRWSTGLMAAMALFSIMLLTLVDVTGRKFFSHSVPGGLEVTEILMVIVIFGALPLVSWRGEHVVFDSLDAFIPSGLRRIQQRVVHLFCAIAFAWMARLMLLRADRFLDYGDITVHLQLPMAPVAWMMALFLFVTALVHLVFVFFRPPEPAFHGAAQPGDAA*