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scnpilot_p_inoc_scaffold_18323_curated_4

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2186..2941)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRN8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 251.0
  • Bit_score: 477
  • Evalue 8.90e-132
Type II and III secretion system protein {ECO:0000313|EMBL:EIK91878.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 251.0
  • Bit_score: 477
  • Evalue 1.30e-131
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 247.0
  • Bit_score: 317
  • Evalue 3.70e-84

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
GCGCGCATCGTGGAAGCCGACGACGACTTCAGCAAATCCATCGGCGTGCGTCTGGGCGGTGGCGTGCGGGACTTCAGCGCAGGCTCGGCCAATGGCAACCCGGTGCGCGGCAACTTCGGCAGCAACTACGGGGCCGTGACCACCGGACCGTCTCTGACCTCCGCCCCCTTCGTGAACCTGCCCGCCTTGCCCCCGTCCGGTCAGGCCGCGTCCTACGCCCTGTCGCTGTTCAGCCCGAACGCCTCGCGCTTCCTGGCGCTGGAAATCTCGGCGCTGGAATCCGATGGCAAGGGCCGCGTGGTGTCCAGTCCTCGCGTGGTCACGGCCGACCAGGTGAAGGCGCTGATCGAGCAGGGCACCGAGTTCCCTTACCAGACCGCCACGTCCAGCGGCGCCACGGCCATCGCGTTCCGCAAGGCCAACCTCAAGCTGGAAGTTACGCCGCAGATCACGCCCGAGGGCAACATCATTCTCGACCTCGACGTGAACAAGGACACCCGTGGCGAAACCACCTCCGAGGGTATCGCCATCGACACCAAGCACGTGCAAACCCAGGTGCTGGTGGAGAACGGCGGCACGGTGGTGATCGGTGGCATCTTCGAGCGCACCGAGCGCAACCAGATCCAGAAGGTGCCGCTGCTGGGCGATCTGCCCGCCGTGGGCAACCTGTTCAAGTCGCGCAACCAGATCGATCAGCGTTCTGAGCTGCTGATCTTCATCACGCCGCGGGTCCTGGGGCGCACCGCCATCAACTAA
PROTEIN sequence
Length: 252
ARIVEADDDFSKSIGVRLGGGVRDFSAGSANGNPVRGNFGSNYGAVTTGPSLTSAPFVNLPALPPSGQAASYALSLFSPNASRFLALEISALESDGKGRVVSSPRVVTADQVKALIEQGTEFPYQTATSSGATAIAFRKANLKLEVTPQITPEGNIILDLDVNKDTRGETTSEGIAIDTKHVQTQVLVENGGTVVIGGIFERTERNQIQKVPLLGDLPAVGNLFKSRNQIDQRSELLIFITPRVLGRTAIN*