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scnpilot_p_inoc_scaffold_6073_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1675..2214

Top 3 Functional Annotations

Value Algorithm Source
dctQ-5; tripartite ATP-independent periplasmic transporter DctQ id=5079520 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 160.0
  • Bit_score: 121
  • Evalue 6.80e-25
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 163.0
  • Bit_score: 92
  • Evalue 1.40e-16
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 149.0
  • Bit_score: 128
  • Evalue 7.80e-27

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Taxonomy

R_Burkholderiales_69_20 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCTCGCGAGCCCCGCCGCGCCGGCGGCCGCGCCCGCCCCACGGATCGCGGTCACGGCGCGGATCCAGACGCTGCTGACCTGGACGGTGGCCGCCGCGATCTTCGCCATGATGCTGCTGCAATGCGCCGACGTGGTCGCGCGCAAGCTGCTCGGCATCGGCCTGCCCGGTGTCGTGGAACTGGTCGAGCTGCTGATGCTCGTGACGGTGTTCGCCGGGCTGCCGCTGGCCTCCCTCCAAGGCGAGCACGTGCTGTTCGACCTGTTCGATCCCTGGCTGCCCGCCCGCCTGAAGCACCTGCAGTCCCGGCTCGCCGACCTGTGCTGCGCGGCGATCCTCGCCGGCATCGGCGTGCTGCTGTTCGCGCGGGCGGCCCGCACCGCCTCGTACGGCGACACCACGCCCATCCTGTCCATCGGGCTGGCGAACTTCCACTACGCGATCGCGGCGCTGCTGCTGCTGACGGCCGCGATGCACCTGGGCCTGGCGTTCGCGCCAGCCCCTTCCATCGACGACACCCCACCGGAGGCCACCCCATGA
PROTEIN sequence
Length: 180
MLASPAAPAAAPAPRIAVTARIQTLLTWTVAAAIFAMMLLQCADVVARKLLGIGLPGVVELVELLMLVTVFAGLPLASLQGEHVLFDLFDPWLPARLKHLQSRLADLCCAAILAGIGVLLFARAARTASYGDTTPILSIGLANFHYAIAALLLLTAAMHLGLAFAPAPSIDDTPPEATP*