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scnpilot_p_inoc_scaffold_1482_curated_12

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 9776..10963

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 393.0
  • Bit_score: 694
  • Evalue 7.80e-197
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 393.0
  • Bit_score: 536
  • Evalue 8.00e-150
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP06_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 393.0
  • Bit_score: 694
  • Evalue 5.60e-197

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGTCCGACGCCCCGCAATTCATCACCATCCTCGGTTCCACGGGCTCGATCGGGCAAAGCACGCTCGACGTGGTCGCGCGCCACCCCGGGCGCTACCGCGTGTTCGCCCTCACCGCCGCGCGCCAGGACGAAGCCCTGTTCCAGCAGTGCCGGGCCTTCCAGCCGCGCATCGCGGTGCTGGTGGACGCCGCCGCCGCCGCGCGTCTGCGCGAGCGCGTGCGCGAGGCCGGCCTGGCCGTCGAGGTGCGGCAGGGTGCCCAGGCCCTGTGCGAGGTGAGCGAAGCGCCCGAGGTGCACGCCGTGATGGCCGCCATCGTCGGTGCCGCCGGCCTGGCGCCCAGCCTGGCCGCCGCGCGCGCCGGCAAGAAACTGCTGCTGGCCAACAAGGAGGCGCTCGTGGTCGGCGGCGATTTGTTCATGGACACCGTGCGCGCCGGCGGCGCCACGCTGCTGCCCATCGACAGCGAGCACTCGGCGGTGTTCCAGTCGCTGCCCGAGGACCCGGCGAGCTGGGAACGGCGCGTGGACAAGATCGTGCTCACGGCCTCCGGGGGGCCTTTTCGCACCCGCGCGCCCGGCACGCTGGCCGATGTCACACCCGAGCAGGCCTGCGCCCACCCCAACTGGGTCATGGGCCGAAAGATCTCGGTCGACTCCGCGACCATGATGAACAAGGCGCTGGAGGTCATCGAGGCGCGCTACCTCTTCGGCCTGGCGCCCGAGCGCATCGAGGTGGTGATCCACCCGCAGAGCGTCATCCACTCCATGGTGCAGTACCGCGACGGCTCCATCGTGGCCCAGCTCGGCACGCCCGATATGCGGGTGCCCATCGCCTATGGCCTGGCCTGGCCCGAGCGCATCGCCTCGGGCGCCAGCGCGCTCGACTTCGCCACCCTGGGCACGCTGAGTTTCGAAACCGCCGACGAGACACGTTTCCCCGGCCTGCCGCTGGCCTGGTCCGCGCTGCGCGGGCCGGCCGGTACCACCGCGGTGCTCAACGCCGCCAACGAGGAGGCCGTGGCGGCCTTTCTCGACCGGCGGCTGCGCTTCGACCACATCCACGCGGTCAACGATGCAACTTTGCAGCGCGTGAGCCCTTCCAAGCCACAATCGCTGGCCGACCTGCTGGCGCTCGACGAAGAGGCCCGCGCCTGCGCGCGGCAGCAAGTCACCCGTTTGCAGACCTGA
PROTEIN sequence
Length: 396
MSDAPQFITILGSTGSIGQSTLDVVARHPGRYRVFALTAARQDEALFQQCRAFQPRIAVLVDAAAAARLRERVREAGLAVEVRQGAQALCEVSEAPEVHAVMAAIVGAAGLAPSLAAARAGKKLLLANKEALVVGGDLFMDTVRAGGATLLPIDSEHSAVFQSLPEDPASWERRVDKIVLTASGGPFRTRAPGTLADVTPEQACAHPNWVMGRKISVDSATMMNKALEVIEARYLFGLAPERIEVVIHPQSVIHSMVQYRDGSIVAQLGTPDMRVPIAYGLAWPERIASGASALDFATLGTLSFETADETRFPGLPLAWSALRGPAGTTAVLNAANEEAVAAFLDRRLRFDHIHAVNDATLQRVSPSKPQSLADLLALDEEARACARQQVTRLQT*