ggKbase home page

scnpilot_p_inoc_scaffold_1797_curated_15

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(14142..14876)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 244.0
  • Bit_score: 455
  • Evalue 5.00e-125
hypothetical protein; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 243.0
  • Bit_score: 369
  • Evalue 1.00e-99
TrmH family RNA methyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHH6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 244.0
  • Bit_score: 455
  • Evalue 3.50e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAAACCCGCTTCGTCCTGATCGAAACCAGCCACGCCGGCAACGTCGGCGGCGCCGCGCGCGCCCTCAAGGTCATGGGCTTCGACGAACTGGTGCTGGTGCGCCCGCGCTGGTCCAACGTGCTGCGCAAGGAGGAGACCATCCAGCGCGCCAGCGGCGCCACCGACGTGCTGGCCAAGACGCGCGTGGTCGACACGCTGGACGAAGCCCTGGACGGCATCACCCACCTGTGCGCCACCGCCATGACGCCGCGCGACTTCGGCCCGCCCACGCGGGCCCCGCGCGAGCACTTCGCCGCCCTGTTGGCCGAGCCCGCGCCGCCGTCCGGCGTGGCCTTCCTGTTCGGCAGCGAGCGCTTCGGCATGGCCAACGAGGACGTCTACCGTTGCCACGCGGCCCTGTCCATTCCCACCGCGCCGGGCTATGGCTCGCTCAACCTGGCGGCCGCGGTGCAGCTCATCGCCTACGACTGGCGCCAGGCCCTGGGGGGCTTCGCGGTCGACTCGCCCGTGGCCGCGCGCCCGGGAGCCGACGCGGCGGCCGTGGCCGGCATGCTGGAGCACCTGCAGCAGGCCCTGGTGGCGGTGGACTTCCTGGACCCGGCCGCGCCCAAGAAGCTGATGCCGCGCCTGCAACAACTCTTCAACCGCGCGCAACCCACCGACGAAGAAGTCCACATTCTTCGCGGTGTTGCCCGCGCCATGCTGCAGACCGCCGAGCGCGCGAAACGCTAG
PROTEIN sequence
Length: 245
MKTRFVLIETSHAGNVGGAARALKVMGFDELVLVRPRWSNVLRKEETIQRASGATDVLAKTRVVDTLDEALDGITHLCATAMTPRDFGPPTRAPREHFAALLAEPAPPSGVAFLFGSERFGMANEDVYRCHAALSIPTAPGYGSLNLAAAVQLIAYDWRQALGGFAVDSPVAARPGADAAAVAGMLEHLQQALVAVDFLDPAAPKKLMPRLQQLFNRAQPTDEEVHILRGVARAMLQTAERAKR*