ggKbase home page

scnpilot_p_inoc_scaffold_7007_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(3..461)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 153.0
  • Bit_score: 297
  • Evalue 1.00e-77
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 153.0
  • Bit_score: 297
  • Evalue 1.40e-77
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 153.0
  • Bit_score: 266
  • Evalue 4.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGTCTGAATCTTTTGCCGCCCTCTTTGAAGAGTCCCTCAAGCGCGCCGAAATGCGCGCGGGCGAAGTCATCACCGCCGAGGTCGTTCGCATCGAACACAACCACGTGGTGGTCAACGCCGGTCTGAAGTCGGAAGCCTACGTCCCGCTGTCCGAATTCAAGAACGACCAAGGCGAACTCGAAGTGCAGGTCGGCGACTTCGTGTCCGTCGCCATCGACTCCGTCGAGAACGGCTTCGGCGACACCCTGCTGTCGCGCGACAAGGCCAAGCGCCTGGCCTCGTGGATGGCCCTGGAAAAGGCCCTGGAGTCGGGCGAATTCGTCACCGGCACCACCACCAGCAAGGTCAAGGGCGGCCTCAAGGTCATGGTCAACGGCATCAGCGCCTTCCTGCCGGGCTCGCTGGTCGACAGCCGTCCCACCAAGGACCTCACCCCCTACGAGAACAAGACCCTGGAA
PROTEIN sequence
Length: 153
MSESFAALFEESLKRAEMRAGEVITAEVVRIEHNHVVVNAGLKSEAYVPLSEFKNDQGELEVQVGDFVSVAIDSVENGFGDTLLSRDKAKRLASWMALEKALESGEFVTGTTTSKVKGGLKVMVNGISAFLPGSLVDSRPTKDLTPYENKTLE