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scnpilot_p_inoc_scaffold_702_curated_18

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 19359..20147

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 262.0
  • Bit_score: 507
  • Evalue 1.50e-140
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 274.0
  • Bit_score: 431
  • Evalue 1.40e-118
tRNA pseudouridine synthase A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKX4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 262.0
  • Bit_score: 507
  • Evalue 1.10e-140

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCCCCGCATCGCGCTGGGCGTGAGCTTTAACGGCCGCGCCTACGACGGCTGGCAGAGCCAGCCCAGCGGCAACACCGTCCAGGACAAGTTGGAGGCGGCGCTCAGCCAGTTCTGTGCCCTGCCCGCCGTGAGCACCCTGTGCGCGGGCCGCACCGACACCGGCGTGCACGGGCTCATGCAGGTGGTGCACTTCGACACCCCCCTGCAGCGCGACGAATACGCCTGGGTGCGAGGCACCAACAGCTTCCTGCCCCCCGACATCGCCGTGCAATGGGCGCGGGAAGTGCCCGCGGCCTTCCACGCCCGCGCCAGCGCCATCGCGCGGCGCTACGCCTACGTGCTGCTCGAATCGCCTGTGCGGCCCAGCGTGGAGCAAGGCCAGGTCGGCTGGGTGTTCCGGCCGCTCAGCCTCGACGCGATGCGCCAGGCCGCCGCCTCGCTCATCGGCGAGCACGACTTCACTTCTTTCCGCGCCTCGCAATGCCAGGCGCACACGCCGGTGAAGGCGCTGCGGCGCATCGACATCACCCGGCGCGGTGCCTACTGGCGCTTCGAGTTCGAGGCCAACGCCTTCCTGCACCACATGATCCGCAACATCATGGGCTGCCTCATCGCCATTGGCAGCGGCAACCGCCCGCCCGGGTGGATGGCCGAGGTGCTGGCCGCCCGCAGCCGCGACGCCGCGGCGCCCACCTTCTCCCCCGACGGCTTGTACTTTCTCGGCCCGGTCTACGATGCCGCCTGGGGCCTGCCCGAGCGCACGCCGGCCTTCGACTGGCTGCCCTAG
PROTEIN sequence
Length: 263
MPRIALGVSFNGRAYDGWQSQPSGNTVQDKLEAALSQFCALPAVSTLCAGRTDTGVHGLMQVVHFDTPLQRDEYAWVRGTNSFLPPDIAVQWAREVPAAFHARASAIARRYAYVLLESPVRPSVEQGQVGWVFRPLSLDAMRQAAASLIGEHDFTSFRASQCQAHTPVKALRRIDITRRGAYWRFEFEANAFLHHMIRNIMGCLIAIGSGNRPPGWMAEVLAARSRDAAAPTFSPDGLYFLGPVYDAAWGLPERTPAFDWLP*