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scnpilot_p_inoc_scaffold_14207_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2..1090)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 363.0
  • Bit_score: 719
  • Evalue 2.70e-204
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 363.0
  • Bit_score: 636
  • Evalue 5.20e-180
Ribonuclease R n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 363.0
  • Bit_score: 719
  • Evalue 1.90e-204

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
GTGGTCCGCGACGACGGCCAGCCCGACATCTACCTTCCCTCCAACGAAATGCGCGCGGTGCTGCACAAGGACCGCGTGAAGGCCCGCATCGTGCGGCTCGACCGCAAGGGCCGTCCCGAGGGCCGCGTCACCGAAATCATCGAGCGCTCCACGGCGCCCATCATCGGCCGCCTGTTGCAAGAGGGCGGCGTGTGGCTCGTGGCGCCAGAAGACAAGCGCTACGGCCAGGACGTGCTGATTCCCAAGGGTGCCACGGGCTCGGCCAAGCCGGGCCAGGTGGTGGTGGTGGAGCTCACCGAGCCGCCCGCGCTGTACGGGCAGCCCGTGGGGCGTGTGAAGGAAGTGCTCGGCGAGATCGACGACCCGGGCATGGAGATCGAGATCGCGGTCCGAAAGTACGGCGTGCCGCACGAGTTCTCGCAGACCGCCATGGCGCAGGCGCGCGCCTTGCCCGATCACGTGCGGCCGAGCGATCTGCGCCACCGGGTGGACCTGCGCGACGTGCCGCTGGTGACCATCGATGGCGAAGACGCGCGCGACTTCGACGACGCCGTGTACTGCGAGCCCGCGAAAGTGGGCAAGGCCAAGGGCTGGCGCCTGCTGGTGGCCATTGCCGACGTGAGCCACTACGTGCAGACCGGTTCGCCCATCGACGTGGACGCCTACGACCGCGCGACCTCGGTCTACTTCCCGCGCCGCGTGATCCCCATGCTGCCAGAGAAGCTGTCCAACGGCCTGTGCTCGCTCAACCCCGGGGTGGAGCGCCTGTGCATGGTGTGCGACATGCTCATCACCGCGCGCGGCGAGATCCACGCCTACCAGTTCTACCCGGCGGTGATGTTCAGCCACGCGCGCCTCACCTACACCGAGGTGGCGGCGATCCTGCAGAACACGCGCGGCCCCGAGGCCATGAACCGCAAGCCGCTGGTGCCGTACCTGCTGAACCTGCACGACGTGTACCGCGCGTTGCTGGCGGCGCGCAACGCGCGCGGGGCGGTGGACTTCGAGACCGTGGAGACGCAGATCGTCTGCGACGAATCGGGCCGCATCGAGCGCATCGTGCCGCGCACGCGCAACGACGCGCACAAG
PROTEIN sequence
Length: 363
VVRDDGQPDIYLPSNEMRAVLHKDRVKARIVRLDRKGRPEGRVTEIIERSTAPIIGRLLQEGGVWLVAPEDKRYGQDVLIPKGATGSAKPGQVVVVELTEPPALYGQPVGRVKEVLGEIDDPGMEIEIAVRKYGVPHEFSQTAMAQARALPDHVRPSDLRHRVDLRDVPLVTIDGEDARDFDDAVYCEPAKVGKAKGWRLLVAIADVSHYVQTGSPIDVDAYDRATSVYFPRRVIPMLPEKLSNGLCSLNPGVERLCMVCDMLITARGEIHAYQFYPAVMFSHARLTYTEVAAILQNTRGPEAMNRKPLVPYLLNLHDVYRALLAARNARGAVDFETVETQIVCDESGRIERIVPRTRNDAHK