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scnpilot_p_inoc_scaffold_1992_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2241..3518

Top 3 Functional Annotations

Value Algorithm Source
Trap-type c4-dicarboxylate large permease subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPP8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 423.0
  • Bit_score: 785
  • Evalue 2.00e-224
Trap-type c4-dicarboxylate large permease subunit {ECO:0000313|EMBL:EIK91188.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 423.0
  • Bit_score: 785
  • Evalue 2.80e-224
TRAP-type C4-dicarboxylate transport system, large permease component similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 425.0
  • Bit_score: 547
  • Evalue 3.70e-153

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
TTGGCCGTGGCGGCCATCGTCCTGCTGAGCCTGCTGGGCGTGCCGATCGGCCAGGCCATGATCGGCGCGTCCATCCTGTACCTCTGGCTCAAAGGCATGGACATGGGCAGCGCGGCCGAGCAGCTGCTCAACAGCACCTATTCCAGCTACCTGCTGCTGGCCATTCCGCTGTTTATCCTGGCCGCCAGCTTCATGAGCTCGGGCAGCGTGCTCGACCGACTGCTGCGCTGGTGCAACGCGCTGGTGGGTCGCTTTCCCGGCGGCCTGGCCCAGGTCAATGTGCTGCAAAGCGTGGTGTTCGCCAGCATGTCGGGCTCGGCCCTGGCCGACGCCGCCGGCTCGGGCAAGCTCATGCAGGCCATGATGACGCGCGATGGCCGCTACCCGCCCGCCTTCGCGGCCGCGCTCACCGCCGTCTCGGCGGTCATCGGGCCCATCCTGCCGCCGTCGATTCCGCTGGTGTTGTACGCGCTGGTCTCGGGCACCTCCATCGGCTACCTCTTCCTGGCCGGCGTGCTGCCCGGGCTCTTGTTGGGTGCGGTGCAGATGGCGCTGATCCACTACCTGGCCAAGCGCCACCGCTTCCCGGTGGAAGACGCCGTGCCGATGCGCGAGCTGCCGGGCATCACGCGCGAGGCCCTGCCCGCGCTGATGATGCCCGTGCTGCTGCTGGGTTGCCTCTACAGCGGCATCACCACGCCCACCGAAGCCGCCGGCGTGGCCGCCGCCTACGCGCTGCTCATCTCGGCCTTCTATTACCGCAGCCTGGGCCTGCGCGACGTCTACCAGTCGCTGCAGCAGAGCGCGCGCACCAGCGTCTCCATCGGCATCCTCATCGCGGGCGCCACGGTGTTCAACTTCGTCATCACCTCGGAGAACATCCCCGCCTCGCTGAGCGCGATGATGCGCGGGCTGGAGCTGTCGCCCTTCACCTTCCTGCTGCTCGCCAACCTGCTGCTGCTCGTGTTGGGCGCCTTCCTCGAAGGCTCGACCATCATCCTGGTGATCCTGCCCGTGCTGTTGCCCACGGCCGTGGCGCTGGGCGTGGACCCGGTGCACTTCGGCGTGGTGGCCGTGCTCAACATCATGATCGGCCTGGTCACGCCGCCGTACGGCCTGCTGCTGTTCATGATGACCAAGATCGCCGACGTTTCGCTGGGCGCGCTGGTGCGCGCCACCCTGCCCTTCCTGGGCGTGATGGTGATCGCGCTGGCCATCACCACCTTCTGGCCCGACTTCGTGCTCTTGCTGCCGCGGCTGGCGGGCTACACGGGTTGA
PROTEIN sequence
Length: 426
LAVAAIVLLSLLGVPIGQAMIGASILYLWLKGMDMGSAAEQLLNSTYSSYLLLAIPLFILAASFMSSGSVLDRLLRWCNALVGRFPGGLAQVNVLQSVVFASMSGSALADAAGSGKLMQAMMTRDGRYPPAFAAALTAVSAVIGPILPPSIPLVLYALVSGTSIGYLFLAGVLPGLLLGAVQMALIHYLAKRHRFPVEDAVPMRELPGITREALPALMMPVLLLGCLYSGITTPTEAAGVAAAYALLISAFYYRSLGLRDVYQSLQQSARTSVSIGILIAGATVFNFVITSENIPASLSAMMRGLELSPFTFLLLANLLLLVLGAFLEGSTIILVILPVLLPTAVALGVDPVHFGVVAVLNIMIGLVTPPYGLLLFMMTKIADVSLGALVRATLPFLGVMVIALAITTFWPDFVLLLPRLAGYTG*