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scnpilot_p_inoc_scaffold_2736_curated_2

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(574..1557)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 327.0
  • Bit_score: 632
  • Evalue 4.00e-178
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 329.0
  • Bit_score: 566
  • Evalue 4.60e-159
DNA-directed RNA polymerase subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV06_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 327.0
  • Bit_score: 632
  • Evalue 2.80e-178

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGCTGAACAACCTGCTCAAGCCCAAGTCCATCAACGTCGAGCAACTCTCGGCCAATCGCGCCAAGGTCACGCTGGAGCCCTTCGAACGTGGCTACGGGCACACCCTGGGCAACGCCCTGCGCCGCGTGCTGCTGTCGTCCATGGTGGGCCATGCCCCCACCGAAGTGACCATCGCTGGCGTGGTGCACGAATACTCGTCCATCGACGGCGTTCAGGAAGACGTGGTCAACCTGCTGCTCAACCTCAAGGGCGTGGTGTTCAAGCTCCACAACCGCGACGAGGTGACCCTGAGTCTGCGCAAGGACGGTGAGGGGGTCGTGACGGCCGCCGACATCCAGACCCCGCACGACGTCGAGATCGTCAACCCCGACCACGTCATCGCCACGCTGTCGGCCGGTGCCAAACTGGACATGCAGATCAAGGTCGAGAAGGGCCGCGGCTACGTGCCCGGCACCCTGCGCCGCGGCGACGAAGCCGCCCGCTCGATCGGCCGCATCGTCCTCGACGCCTCTTTCTCGCCGGTCAAGCGCGTGAGCTACACGGTGGAAAGCGCCCGCGTCGAGCAGCGCACCGACCTCGACAAGCTCGTGCTCGAGATCGAGACCAACGGCTCCATTGGCCCCGAAGAGGCCGTGCGCGCCTCGGCCAAGATCCTCGTTGAACAGCTCGCCGTGTTCGCCCAGCTGGAAGGCGCCGACCTCTTCACCGAGGCCCCGCAACAGCGCAGCTCGCAGCAGTTCGATCCGATCCTGCTGCGTCCCGTGGACGAGCTCGAGCTCACCGTGCGTTCGGCGAACTGCCTGAAGGCCGAGAACATCTATTACATCGGTGACCTGATTCAGCGCACCGAGAACGAGCTGCTCAAGACCCCGAACCTGGGCCGCAAGTCGCTCAACGAAATCAAGGAAGTGTTGGCCTCGCGTGGTCTCACGCTGGGCATGAAGCTCGAGAACTGGCCGCCCGCCGGCCTCGACAAGCACTGA
PROTEIN sequence
Length: 328
MLNNLLKPKSINVEQLSANRAKVTLEPFERGYGHTLGNALRRVLLSSMVGHAPTEVTIAGVVHEYSSIDGVQEDVVNLLLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEIVNPDHVIATLSAGAKLDMQIKVEKGRGYVPGTLRRGDEAARSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVLEIETNGSIGPEEAVRASAKILVEQLAVFAQLEGADLFTEAPQQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKH*