ggKbase home page

scnpilot_p_inoc_scaffold_2736_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(5441..5623)

Top 3 Functional Annotations

Value Algorithm Source
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5080769 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 61.0
  • Bit_score: 109
  • Evalue 1.50e-21
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 60.0
  • Bit_score: 106
  • Evalue 2.40e-21
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 61.0
  • Bit_score: 111
  • Evalue 5.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGAGCACTCCCAACACCCTGAAGGTCCAGCTCGTGCGCAGCCCCATCGGCTGCAAGCAGAGCCACCGCGACACCGTGCGCGGCCTGGGCCTGCGCAAGCTCAACAGCATCAGCGAACTGCAGGACACCCCGGCCGTGCGCGGCATGATCAACAAGATCAGCTACCTGGTCAAAGTCCTCTGA
PROTEIN sequence
Length: 61
MSTPNTLKVQLVRSPIGCKQSHRDTVRGLGLRKLNSISELQDTPAVRGMINKISYLVKVL*