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scnpilot_p_inoc_scaffold_2736_curated_12

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(6172..6537)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV16_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 220
  • Evalue 1.20e-54
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 220
  • Evalue 1.70e-54
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 121.0
  • Bit_score: 206
  • Evalue 5.80e-51

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCTGACCAAGAAAGAACAACGCCTGCGCCGCGCGCGCCAGACCCGCATTCGCATCGCCCAGCAAGGCGCGGTGCGCCTGACGGTGAACCGCACCAACCTGCACATCTACGCCAACGTCGTGTCCGCCGACGGCTCGCGCATCCTCGCCTCGGCTTCCACGGCCGAGAAGGAAGTGCGCGCCCAACTGGGCGCCTCGGGCAAGGGTGGCAACGCCGCCGCTGCCGCCGTCATCGGCAAGCGCATCGCCGAGAAGGCGAAGGCCGCCGGCATCGAGAAAGTGGCGTTCGACCGCTCGGGCTTTGCCTACCACGGCCGCGTCAAGGCCCTTGCAGACGCCGCCCGCGAGGCCGGCCTGCAGTTCTGA
PROTEIN sequence
Length: 122
MLTKKEQRLRRARQTRIRIAQQGAVRLTVNRTNLHIYANVVSADGSRILASASTAEKEVRAQLGASGKGGNAAAAAVIGKRIAEKAKAAGIEKVAFDRSGFAYHGRVKALADAAREAGLQF*