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scnpilot_p_inoc_scaffold_2736_curated_18

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(8708..9019)

Top 3 Functional Annotations

Value Algorithm Source
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5080777 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 200
  • Evalue 8.70e-49
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 103.0
  • Bit_score: 194
  • Evalue 2.00e-47
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 200
  • Evalue 1.20e-48

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGTGCATCAAGGTGCTCGGCGGCTCCAAGCGCCGCTACGCCAGCGTGGGCGATGTCATCAAGGTCAGCATCAAGGAAGCAGCGCCTCGCGGCCGCGTCAAAAAGGGCGAGGTCTACAACGCCGTGGTGGTGCGCACCGCCAAGGGCATTCGCCGCCAGGACGGCGCACTGATCAAGTTCGATGGCAACGCGGCTGTGTTGCTCAACGCCAAGCTGGAGCCCATCGGCACCCGCATCTTCGGCCCGGTGACGCGCGAGTTGCGCACCGAGAAGTTCATGAAGATCGTGTCGCTGGCCCCTGAGGTCCTCTGA
PROTEIN sequence
Length: 104
MCIKVLGGSKRRYASVGDVIKVSIKEAAPRGRVKKGEVYNAVVVRTAKGIRRQDGALIKFDGNAAVLLNAKLEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL*