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scnpilot_p_inoc_scaffold_1909_curated_1

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1..312

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 184
  • Evalue 9.00e-44
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 143
  • Evalue 3.00e-32
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ04_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 103.0
  • Bit_score: 184
  • Evalue 6.40e-44

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
AACATGCGCTGGGCCAAGCCGCTCGACACCGACCTGCTGCGCGAGATCGCGCGCACGCACGAGGCCATCGTCACGGTGGAAGAGGGCAGCGTCATGGGCGGCGCCGGCAGCGCCGTGATGGAGGCGCTGCAGGCCGAGGGCCTGGCGCTGCCGGTGCTGGCGCTGGGCCTGCCCGACAGCTTCATCGAACACGGCGATCCGGCCAAGCTGCTGTCCCTGCAGGGCCTGGACGCCGCCGGCATCGAGCGCAGCGTGCGCGAGCGCTTCGGCGCGCTCCTGGACGGTGCGTCGGGCCTGAAGGTCGTGGCCTGA
PROTEIN sequence
Length: 104
NMRWAKPLDTDLLREIARTHEAIVTVEEGSVMGGAGSAVMEALQAEGLALPVLALGLPDSFIEHGDPAKLLSLQGLDAAGIERSVRERFGALLDGASGLKVVA*