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scnpilot_p_inoc_scaffold_19432_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(1957..2670)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMN5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 2.20e-116
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 3.10e-116
lafS; RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 230.0
  • Bit_score: 276
  • Evalue 9.00e-72

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGCACAGCGGATACGGCGAGATGAACAGCCTGGCTGCGGCGGAGAGCTCCGCCGCGGCGGAGCAGCGCTGGCTCGTCGAGCACACGCCGCTGGTGCGCCGCGCGGTGGCCCAGCTCGCCTCGCAGGCGGGTGGCGCCATGGACCGCGAGGACATGCTGCAGATCGGCCTGATGGGCCTGCTGGAGGCCTTGCGCCGCTACGGCGAGCCCGACGAACGTTTCCCCGGCTACGCCGCGCAGCGCGTGCGCGGCGCCATTCTCGACGAGCTGCGCCGCCAGGACTGGCGCCCGCGCAGCGTGCGCCAGGAAGGCCACCGCCTGCGCGACGGCATCCGCGAGCTGCGCCGCCGCCTCGGCCACGAACCCTCCGAGGCCGAGGTGATGCAGCACCTGGGCGTGAGCGCCGAGGACTACCTGGCCTACGAGCAGCACACCAACGCCGAGACCCTGGCCAGCTTCGACGAAGTGATCGAAGAGCTGATGCTCACGCCCTCGGCCGCGCGCACGCCCGAGGCCGAGCTGATCCAGCGCCGCTCGCTGGAGCAGGCCCTGGCCTGCCTGAACCCGAAGGAGCAGCACGTGGTGCAGCTCTATTACGAAGCCGAGCTCAGCCTCAAGGAGATCGGCGCCGTCATGGGCCTGACCGAGGCCCGCGTCTGCCAGATCAACAAAAGCGCACTGCACAAGTTGCGCGGCGCGCTCTCGCCCGACTGA
PROTEIN sequence
Length: 238
VHSGYGEMNSLAAAESSAAAEQRWLVEHTPLVRRAVAQLASQAGGAMDREDMLQIGLMGLLEALRRYGEPDERFPGYAAQRVRGAILDELRRQDWRPRSVRQEGHRLRDGIRELRRRLGHEPSEAEVMQHLGVSAEDYLAYEQHTNAETLASFDEVIEELMLTPSAARTPEAELIQRRSLEQALACLNPKEQHVVQLYYEAELSLKEIGAVMGLTEARVCQINKSALHKLRGALSPD*