ggKbase home page

scnpilot_p_inoc_scaffold_4924_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1251..1874

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJT6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 7.90e-110
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 1.10e-109
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 207.0
  • Bit_score: 364
  • Evalue 1.70e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCAAGTCGAACTCCTCAACGACCAAGGCCAGGCCGCGTCCAAGCTGGACGTGCCCGAGACCGTGTTTGGTCGTGACTACAACGAAGCCCTGATCCACCAGCTCGTGGTGGCGTACCAAGCGAACGCCCGTCAAGGCACGCGTGCTCAAAAAGACCGCCAGATGGTCAAGCACTCGACCAAGAAGCCGTTCAAGCAGAAGGGCACCGGCCGCGCTCGCGCCGGCATGACCTCCTCGCCGCTGTGGCGTGGGGGCGGTCGCATCTTCCCGAACAGCCCCGACGAGAACTTCACCCAGAAGCTCAACAAGAAGATGTACCGCGCCGGCATGGCGTCCATCTTCTCGCAGCTGGTCCGTGAAGGCCGTCTGTCCGTGGTCGAGTCGATCAAGGTCGATTCGCCCAAGACCAAGCAGCTGGCCGACAAGTTCAAGGCGATGAACCTGAAGTCGTCGGTGCTCGTGATCGCTGACGAAGTCGACGAGAACCTGTACCTGGCCTCGCGCAACCTGGTCAACGTGCTGGTGGTCGAGCCCCGTTACGCCGACCCGCTGTCGCTGGTGCACTACAAGCAAGTGATCGTCACCAAGGCGGCGATCGACCAGCTCAAGGAGATGTTCGCATGA
PROTEIN sequence
Length: 208
MQVELLNDQGQAASKLDVPETVFGRDYNEALIHQLVVAYQANARQGTRAQKDRQMVKHSTKKPFKQKGTGRARAGMTSSPLWRGGGRIFPNSPDENFTQKLNKKMYRAGMASIFSQLVREGRLSVVESIKVDSPKTKQLADKFKAMNLKSSVLVIADEVDENLYLASRNLVNVLVVEPRYADPLSLVHYKQVIVTKAAIDQLKEMFA*