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scnpilot_p_inoc_scaffold_4924_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2188..3012

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJT4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 4.10e-154
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 5.70e-154
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 274.0
  • Bit_score: 504
  • Evalue 2.30e-140

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGCTGTCATCAAGATGAAACCGACCTCGCCAGGCCGTCGCGGCATGGTGAAGGTCACGCGCGAAAACCTGCACAAGGGTGCCGGTTACGCGCCGCTGCTGGAGCCTCAGTTCCAGAAAGCCGGCCGCAACAACAACGGCCACATCACGACGCGCCACAAGGGCGGTGGTGCCAAGCACCACTACCGCGTGGTCGACTTCCGCCGCAACAAGGACAACATCCCGGCGAAGGTCGAGCGCATCGAGTACGACCCGAACCGCACCGCGCACATCGCGCTGCTGTGCTACGCCGACGGCGAGCGCCGCTACATCATCGCGCCGCGCGGCGTCGAGGTGGGCGCCACGCTGCTGTCGGGCTCGGAGTCGCCGATCCGCGTGGGCAACACCCTGCCGATCCGCAACATCCCCGTGGGTTCGACGATCCACTGCATTGAGCTGCAGGTCGGCAAGGGCGCGCAGATGGCGCGTTCGGCCGGTGCCTCGGCCGTGCTGCTGGCCCGCGAAGGCATCTACGCCCAGGTGCGCATGCGCTCGGGCGAAGTGCGCAAGATCCACGTGGACTGCCGCGCCACCATCGGCGAGGTCTCCAACACCGAGCACAGCCTGCGCCAGATCGGCAAGGCCGGTGCCGTGCGCCACATGGGCATCCGCCCGACCGTTCGCGGCACCGCGATGAACCCGATCGACCACCCGCACGGTGGTGGTGAGGGCAAGACCGGCGAAGGCCGCGCTCCGGTGGATCCGTGGGGCAACCTCACCAAGGGTTACCGTACCCGCAACAACCGCCGCACGCAGTCGATGATCGTCTCGCGTCGCAAGAAGTAA
PROTEIN sequence
Length: 275
MAVIKMKPTSPGRRGMVKVTRENLHKGAGYAPLLEPQFQKAGRNNNGHITTRHKGGGAKHHYRVVDFRRNKDNIPAKVERIEYDPNRTAHIALLCYADGERRYIIAPRGVEVGATLLSGSESPIRVGNTLPIRNIPVGSTIHCIELQVGKGAQMARSAGASAVLLAREGIYAQVRMRSGEVRKIHVDCRATIGEVSNTEHSLRQIGKAGAVRHMGIRPTVRGTAMNPIDHPHGGGEGKTGEGRAPVDPWGNLTKGYRTRNNRRTQSMIVSRRKK*