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scnpilot_p_inoc_scaffold_79_curated

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Displaying items 31-60 of 267 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_79_curated_31
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23738..24718
DNA (981bp) protein (327aa)
Putative High-affinity branched-chain amino acid transport system permease protein livM n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0W9_9PROT
Putative High-affinity branched-chain amino acid transport system permease protein livM {ECO:0000313|EMBL:CDK99037.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative branched-chain amino acid ABC transporter, permease protein
scnpilot_p_inoc_scaffold_79_curated_32
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24711..25460
DNA (750bp) protein (250aa)
Putative High-affinity branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3I4_9PROT
Putative High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDK99038.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
branched-chain amino acid ABC transporter,ATP-binding component
scnpilot_p_inoc_scaffold_79_curated_33
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25460..26152
DNA (693bp) protein (231aa)
ABC transporter ATP-binding protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U5N0_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAM78187.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ABC transporter, ATP-binding protein
scnpilot_p_inoc_scaffold_79_curated_34
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26167..26691
DNA (525bp) protein (175aa)
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CAM75199.1}; EC=2.4.2.6 {ECO:0000313|EMBL:CAM75199.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX42_9PROT
nucleoside 2-deoxyribosyltransferase
scnpilot_p_inoc_scaffold_79_curated_35
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26726..28210)
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Signal transduction histidine kinase regulating C4-dicarboxylate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VZ71_MAGSA
Signal transduction histidine kinase regulating C4-dicarboxylate transport system
scnpilot_p_inoc_scaffold_79_curated_36
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28194..28934)
DNA (741bp) protein (247aa)
Response regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ACS4_9PROT
Response regulator {ECO:0000313|EMBL:EME70319.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
response regulator
scnpilot_p_inoc_scaffold_79_curated_37
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28924..29325)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VZ69_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE53106.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_79_curated_38
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29354..30115)
DNA (762bp) protein (254aa)
Type III secretion system inner membrane P protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U380_9PROT
Type III secretion system inner membrane P protein {ECO:0000313|EMBL:CAM77337.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
scnpilot_p_inoc_scaffold_79_curated_39
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30112..30411)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U379_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77336.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_79_curated_40
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30398..30694)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U378_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77335.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_79_curated_41
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30691..31092)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F414_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00194.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
flagellar protein FhlB cytoplasmic domain-containing protein; K04061 flagellar biosynthesis protein
scnpilot_p_inoc_scaffold_79_curated_42
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31234..31626
DNA (393bp) protein (131aa)
Putative flagellar basal-body rod protein FlgB n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3T8_9PROT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flagellar basal body protein; K02387 flagellar basal-body rod protein FlgB
scnpilot_p_inoc_scaffold_79_curated_43
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31630..32043
DNA (414bp) protein (138aa)
Flagellar basal-body rod protein FlgC (Cell-proximal rod protein) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F795_9PROT
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
scnpilot_p_inoc_scaffold_79_curated_44
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32069..32386
DNA (318bp) protein (106aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U374_9PROT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
scnpilot_p_inoc_scaffold_79_curated_45
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32411..32680
DNA (270bp) protein (90aa)
Bacterial export protein FliQ, family 3 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U373_9PROT
Bacterial export protein FliQ, family 3 {ECO:0000313|EMBL:CAM77330.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flagellar biosynthesis pathway; K02420 flagellar biosynthetic protein FliQ
scnpilot_p_inoc_scaffold_79_curated_46
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32721..33485
DNA (765bp) protein (255aa)
Putative Flagellar biosynthetic protein fliR n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F418_9PROT
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR
scnpilot_p_inoc_scaffold_79_curated_47
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33489..34559
DNA (1071bp) protein (357aa)
Flagellar export pore protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3U2_9PROT
Flagellar export pore protein {ECO:0000313|EMBL:CDL00200.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB
scnpilot_p_inoc_scaffold_79_curated_48
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34549..36939
DNA (2391bp) protein (797aa)
Signal transduction histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
Sensor histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U370_9PROT
Sensor histidine kinase {ECO:0000313|EMBL:CAM77327.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_79_curated_49
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


37061..38137
DNA (1077bp) protein (359aa)
Protein RecA n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U369_9PROT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
recA; recombinase A; K03553 recombination protein RecA
scnpilot_p_inoc_scaffold_79_curated_50
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38255..40069)
DNA (1815bp) protein (605aa)
DNA mismatch repair protein MutL n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2L0_9PROT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
scnpilot_p_inoc_scaffold_79_curated_51
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40184..40627
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5B7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99688.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_79_curated_52
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40650..42335)
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CDL00797.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative sensor histidine kinase with MCP region (EC:2.7.13.3)
Putative signal transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F614_9PROT
scnpilot_p_inoc_scaffold_79_curated_53
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42457..43797)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8H5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00796.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_79_curated_54
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43867..45717
DNA (1851bp) protein (617aa)
Putative ABC transporter family ATP-binding protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5M4_9PROT
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components {ECO:0000313|EMBL:CAM77415.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_p_inoc_scaffold_79_curated_55
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45714..46151)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y962_THIV6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL73530.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
scnpilot_p_inoc_scaffold_79_curated_56
unknown

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comp(46142..46612)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_curated_57
unknown

Not on your lists

comp(46584..47126)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_curated_58
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47197..47559)
DNA (363bp) protein (121aa)
Histidine triad (HIT) family protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWE3_9PROT
Purine nucleoside phosphoramidase {ECO:0000313|EMBL:CDL00703.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_79_curated_59
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47569..47889)
DNA (321bp) protein (107aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hisE; phosphoribosyl-ATP pyrophosphatase; K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWE2_9PROT
scnpilot_p_inoc_scaffold_79_curated_60
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47889..48416)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5B3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00705.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
FkbM family methyltransferase
Displaying items 31-60 of 267 in total

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