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scnpilot_p_inoc_scaffold_611_curated

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Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_611_curated_31
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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29064..29456
DNA (393bp) protein (131aa)
Protein ApaG n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP1_9PROT
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
apaG; ApaG protein; K06195 ApaG protein
scnpilot_p_inoc_scaffold_611_curated_32
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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29509..30171
DNA (663bp) protein (221aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP0_9PROT
scnpilot_p_inoc_scaffold_611_curated_33
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30351..31457)
DNA (1107bp) protein (369aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN9_9PROT
scnpilot_p_inoc_scaffold_611_curated_34
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31550..32155)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN8_9PROT
scnpilot_p_inoc_scaffold_611_curated_35
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32171..33574)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5K4_9PROT
scnpilot_p_inoc_scaffold_611_curated_36
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(33786..34265)
DNA (480bp) protein (160aa)
50S ribosomal protein L19 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN5_9PROT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
scnpilot_p_inoc_scaffold_611_curated_37
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(34334..35050)
DNA (717bp) protein (239aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8A0_9PROT
scnpilot_p_inoc_scaffold_611_curated_38
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(35040..35618)
DNA (579bp) protein (193aa)
Ribosome maturation factor RimM n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN3_9PROT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
scnpilot_p_inoc_scaffold_611_curated_39
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(35625..35999)
DNA (375bp) protein (125aa)
30S ribosomal protein S16 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN2_9PROT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CDL00766.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
scnpilot_p_inoc_scaffold_611_curated_40
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36040..37407)
DNA (1368bp) protein (456aa)
Signal recognition particle protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN1_9PROT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Signal recognition particle GTPase; K03106 signal recognition particle subunit SRP54
scnpilot_p_inoc_scaffold_611_curated_41
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37616..38566
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
Putative UDP-glucose 4-epimerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5R2_9PROT
Putative UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDL00764.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_611_curated_42
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38658..41165
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F895_9PROT
Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain {ECO:0000313|EMBL:CAM75036.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
signal transduction protein
scnpilot_p_inoc_scaffold_611_curated_43
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41267..41998
DNA (732bp) protein (244aa)
DnaJ-class molecular chaperone n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUP6_9PROT
DnaJ-class molecular chaperone {ECO:0000313|EMBL:CAM74353.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_611_curated_44
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42002..42541
DNA (540bp) protein (180aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682, ECO:0000313|EMBL:CDL00761.1}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682, ECO:0000313|EMBL:CDL00761.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8F8_9PROT
histidinol phosphatase and related phosphatase
scnpilot_p_inoc_scaffold_611_curated_45
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42688..44661)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F891_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00758.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_611_curated_46
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44661..46583)
DNA (1923bp) protein (641aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUP2_9PROT
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CAM74349.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
nucleoside-diphosphate sugar epimerase; K13013 O-antigen biosynthesis protein WbqV
scnpilot_p_inoc_scaffold_611_curated_47
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46631..47887)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8F3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00756.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
glycosyltransferase
scnpilot_p_inoc_scaffold_611_curated_48
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47934..49964)
DNA (2031bp) protein (677aa)
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) {ECO:0000313|EMBL:CDL00755.1}; EC=2.4.2.- {ECO:0000313|EMBL:CDL00755.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
pbpC; penicillin binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5G6_9PROT
scnpilot_p_inoc_scaffold_611_curated_49
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49961..54835)
DNA (4875bp) protein (1625aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5M8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00754.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein; K06894
scnpilot_p_inoc_scaffold_611_curated_50
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54913..55860)
DNA (948bp) protein (316aa)
Phenylacetic acid-responsive transcriptional repressor n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TXX0_9PROT
Putative Phenylacetic acid-responsive transcriptional repressor {ECO:0000313|EMBL:CDL00753.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
phenylacetic acid-responsive transcriptional repressor; K02616 phenylacetic acid degradation operon negative regulatory protein
scnpilot_p_inoc_scaffold_611_curated_51
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56248..56436
DNA (189bp) protein (63aa)
ABC-type branched-chain amino acid transport systems, periplasmic component n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TXW9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00752.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ABC-type branched-chain amino acid transport systems, periplasmic component; K01999 branched-chain amino acid transport system substrate-binding protein
Displaying items 31-51 of 51 in total

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