ggKbase home page

scnpilot_p_inoc_scaffold_16_curated

Search features with annotation key words

Displaying items 511-528 of 528 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_16_curated_511
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(523401..524180)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZX0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98712.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_16_curated_512
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

524397..526109
DNA (1713bp) protein (571aa)
Putative chemoreceptor n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXM3_9PROT
Putative chemoreceptor {ECO:0000313|EMBL:CDK97949.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_16_curated_513
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

526182..528470
DNA (2289bp) protein (763aa)
Adenylate cyclase, family 3 (Some proteins contain HAMP domain) n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2F6_9PROT
Adenylate cyclase, family 3 (Some proteins contain HAMP domain) {ECO:0000313|EMBL:CAM77063.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Calphotin; microtubule-associated protein 4
scnpilot_p_inoc_scaffold_16_curated_514
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528478..529317)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0Y7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97946.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hydrolase or acyltransferase
scnpilot_p_inoc_scaffold_16_curated_515
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529395..530855
DNA (1461bp) protein (487aa)
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase [NADP+ n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G2_9PROT
Succinate-semialdehyde dehydrogenase [NADP+ {ECO:0000313|EMBL:CAM77069.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_16_curated_516
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

530931..531644
DNA (714bp) protein (238aa)
Transcriptional activator protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G3_9PROT
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:CDK97944.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
autoinducer-binding domain-containing protein
scnpilot_p_inoc_scaffold_16_curated_517
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

531748..533061
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444, ECO:0000313|EMBL:CDK97943.1};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
coenzyme F390 synthetase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G4_9PROT
scnpilot_p_inoc_scaffold_16_curated_518
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

533058..533588
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G5_9PROT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CAM77072.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
acetyltransferase
scnpilot_p_inoc_scaffold_16_curated_519
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

533694..535556
DNA (1863bp) protein (621aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
indolepyruvate oxidoreductase subunit IORA; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase,subunit alpha n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G6_9PROT
scnpilot_p_inoc_scaffold_16_curated_520
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

535553..536176
DNA (624bp) protein (208aa)
Putative Indolepyruvate oxidoreductase subunit {ECO:0000313|EMBL:CDK97940.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CDK97940.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8); K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase, beta subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G7_9PROT
scnpilot_p_inoc_scaffold_16_curated_521
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

536280..536672
DNA (393bp) protein (131aa)
CheY-like receiver n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G8_9PROT
CheY-like receiver {ECO:0000313|EMBL:CAM77075.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
FOG: CheY-like receiver
scnpilot_p_inoc_scaffold_16_curated_522
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536705..537085)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6EXW8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98044.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_16_curated_523
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537082..537585)
DNA (504bp) protein (168aa)
ABC transporter substrate binding protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWR1_9PROT
ABC transporter substrate binding protein {ECO:0000313|EMBL:CAM75068.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component; K02067 putative ABC transport system substrate-binding protein
scnpilot_p_inoc_scaffold_16_curated_524
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537606..538097)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F178_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98046.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
scnpilot_p_inoc_scaffold_16_curated_525
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(538119..538469)
DNA (351bp) protein (117aa)
Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 {ECO:0000313|EMBL:CDK98047.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDK98047.1};; EC=1.6.99.3 {ECO:0000313|EMBL:CDK98047.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
NADH dehydrogenase (EC:1.6.99.3); K00356 NADH dehydrogenase [EC:1.6.99.3]
Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY28_9PROT
scnpilot_p_inoc_scaffold_16_curated_526
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

538803..542441
DNA (3639bp) protein (1213aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleotide reductase large subunit n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWQ7_9PROT
Ribonucleotide reductase large subunit {ECO:0000313|EMBL:CAM75064.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_16_curated_527
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(542744..543469)
DNA (726bp) protein (242aa)
UPI0003CEE94D related cluster n=1 Tax=unknown RepID=UPI0003CEE94D
Uncharacterized protein {ECO:0000313|EMBL:ESY28890.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein
scnpilot_p_inoc_scaffold_16_curated_528
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(543583..544614)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBP0_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25000.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying items 511-528 of 528 in total

View Taxonomy