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scnpilot_p_inoc_scaffold_379_curated

Search features with annotation key words

Displaying items 61-82 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_379_curated_61
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71976..72887
DNA (912bp) protein (304aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
NAD dependent epimerase/dehydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV92_9PROT
NAD dependent epimerase/dehydratase {ECO:0000313|EMBL:EDP63508.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_p_inoc_scaffold_379_curated_62
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72874..73794)
DNA (921bp) protein (307aa)
transketolase, central region; K00615 transketolase [EC:2.2.1.1]
Transketolase subunit B {ECO:0000313|EMBL:ABJ05468.1}; EC=2.2.1.1 {ECO:0000313|EMBL:ABJ05468.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Transketolase subunit B n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RG6_RHOP5
scnpilot_p_inoc_scaffold_379_curated_63
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73791..74624)
DNA (834bp) protein (278aa)
transketolase domain-containing protein; K00615 transketolase [EC:2.2.1.1]
Transketolase domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV95_9PROT
Transketolase domain protein {ECO:0000313|EMBL:EDP63510.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_p_inoc_scaffold_379_curated_64
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74631..75623)
DNA (993bp) protein (331aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ABJ05466.1}; EC=4.2.1.46 {ECO:0000313|EMBL:ABJ05466.1};; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347D033
scnpilot_p_inoc_scaffold_379_curated_65
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75620..76120)
DNA (501bp) protein (167aa)
Putative NUDIX hydrolase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QTW4_METSZ
NUDIX hydrolase)
Putative NUDIX hydrolase {ECO:0000313|EMBL:CCJ07540.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_p_inoc_scaffold_379_curated_66
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76117..76773)
DNA (657bp) protein (219aa)
methyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A0BB5
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABJ05465.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_p_inoc_scaffold_379_curated_67
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76773..77654)
DNA (882bp) protein (294aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RH0_RHOP5
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABJ05464.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_p_inoc_scaffold_379_curated_68
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(77756..79036)
DNA (1281bp) protein (427aa)
UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
GDP-mannose dehydrogenase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003496B1F
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
scnpilot_p_inoc_scaffold_379_curated_69
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(79033..79953)
DNA (921bp) protein (307aa)
Oxidoreductase, NAD-binding n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QPZ0_METSZ
oxidoreductase, NAD-binding
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
scnpilot_p_inoc_scaffold_379_curated_70
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(79955..81505)
DNA (1551bp) protein (517aa)
Cytidyltransferase-related domain n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RH3_RHOP5
cytidyltransferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
scnpilot_p_inoc_scaffold_379_curated_71
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81519..82547)
DNA (1029bp) protein (343aa)
NAD dependent epimerase/dehydratase family; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD dependent epimerase/dehydratase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVA2_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_p_inoc_scaffold_379_curated_72
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82547..83278)
DNA (732bp) protein (244aa)
putative translaldolase; K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Transaldolase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RH6_RHOP5
scnpilot_p_inoc_scaffold_379_curated_73
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83263..83832)
DNA (570bp) protein (190aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVA4_9PROT
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:EWY42515.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_p_inoc_scaffold_379_curated_74
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(84049..84633)
DNA (585bp) protein (195aa)
Sugar isomerase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVA5_9PROT
sugar isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
scnpilot_p_inoc_scaffold_379_curated_75
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84669..85745)
DNA (1077bp) protein (359aa)
Radical SAM family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BPK9_9GAMM
Radical SAM family protein {ECO:0000313|EMBL:EDN71526.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
radical SAM protein
scnpilot_p_inoc_scaffold_379_curated_76
unknown

Not on your lists

comp(85956..86201)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_379_curated_77
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86642..87562)
DNA (921bp) protein (307aa)
alpha-D-QuiNAc alpha-1,3-galactosyltransferase (EC:2.4.1.-)
Alpha-D-QuiNAc alpha-1,3-galactosyltransferase {ECO:0000313|EMBL:ABC78492.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC78492.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Alpha-D-QuiNAc alpha-1,3-galactosyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWN3_SYNAS
scnpilot_p_inoc_scaffold_379_curated_78
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88965..89564)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVX1_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74778.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_379_curated_79
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89551..89910)
DNA (360bp) protein (120aa)
Chitinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVX0_9PROT
Chitinase {ECO:0000313|EMBL:CAM74777.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
prophage PSPPH02 chitinase; K03791 putative chitinase
scnpilot_p_inoc_scaffold_379_curated_80
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89858..90124)
DNA (267bp) protein (89aa)
Lytic enzyme {ECO:0000313|EMBL:CDK99778.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CDK99778.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Lytic enzyme n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5M5_9PROT
hypothetical protein
scnpilot_p_inoc_scaffold_379_curated_81
Magnetovibrio blakemorei, Magnetovibrio, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90132..90479)
DNA (348bp) protein (116aa)
Phage-related protein n=1 Tax=Magnetovibrio blakemorei RepID=C4RAI9_9PROT
Phage-related protein {ECO:0000313|EMBL:CAV30834.1}; TaxID=28181 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetovibrio.;" source="Magnetovibrio blakemorei.;"
hypothetical protein
scnpilot_p_inoc_scaffold_379_curated_82
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90536..91276)
DNA (741bp) protein (247aa)
Transposase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z540_9PROT
Transposase {ECO:0000313|EMBL:EME69445.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
transposase
Displaying items 61-82 of 82 in total

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