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scnpilot_p_inoc_scaffold_537_curated_55

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(48700..49314)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF family protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2D0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 190.0
  • Bit_score: 291
  • Evalue 5.60e-76
RNA polymerase sigma-70 factor, ECF family protein {ECO:0000313|EMBL:CDK99685.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 190.0
  • Bit_score: 291
  • Evalue 7.90e-76
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 186.0
  • Bit_score: 198
  • Evalue 2.70e-48

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
TTGCCGCCTTTGGGGGTGGAGTGTTTCGATGATCCGGGTGCGGCCATGAACGACAGCCGCGACGACGACGAATTGCTGGAACTGACAGCCGCGGGGGACCGCGACGCCTTTCAGACACTGATGGAAAGGCATGTCAAATCCATGTTGATGCTGGCCCAACGGGTCAGCGGCAATTCCGACGACGCCGAGGAACTGGTCCAGGACGCCTTCTTGAAGGTGTGGACGCAGGCGCCCAAGTGGCGCCGCGACGGGGCTGCGCTGTTTTCGACCTGGCTTTACCGGGTCGTCCTGAACGGCTGCCTGGACCGCCGCCGTCGTCCGGTGTGGACCGGGCTGGACGAAGCGGCCGAACTGGCCGACACCGCCCCCGGCGCCACCCAGCATCTGGCCCAGCAACAAAGCCGCGTCATGATCCAAGAGGCGCTGGCCATCATCCCCGACCGCCAGCGCGCCGCCCTTTACCTGCATTATTTTTCTGAAATCAGCGCCCCACAGGCGGCCCAGGTGCTGGATATCAGCGTGCCGGCGATGGAAGCCCTCTTGATACGCGGCAAGCGAGCGCTTAAGAAAGAATTGATACGCCGAGGCGTCACCGACCTTGGAGACATGCTTTGA
PROTEIN sequence
Length: 205
LPPLGVECFDDPGAAMNDSRDDDELLELTAAGDRDAFQTLMERHVKSMLMLAQRVSGNSDDAEELVQDAFLKVWTQAPKWRRDGAALFSTWLYRVVLNGCLDRRRRPVWTGLDEAAELADTAPGATQHLAQQQSRVMIQEALAIIPDRQRAALYLHYFSEISAPQAAQVLDISVPAMEALLIRGKRALKKELIRRGVTDLGDML*