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scnpilot_p_inoc_scaffold_79_curated_255

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 249443..250273

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 278.0
  • Bit_score: 442
  • Evalue 4.90e-121
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 276.0
  • Bit_score: 369
  • Evalue 6.90e-100
Shikimate dehydrogenase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4S6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 278.0
  • Bit_score: 442
  • Evalue 3.50e-121

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGATCCTTTCGGGCAAGGCCAAACTGGCCGGGGTCTTGGGCTGGCCGGTGGGCCATTCCCGCTCGCCGCGTCTGCACGGCTATTGGCTGGAACAATTGGGTATCGACGGCACCTATGTGCCGTTGCCGGTGGCCCCGGAAAATTTCGAAAAAGTGTTCCGGGCCCTGCCCGCCATGGGCTTTCGCGGCGCCAACGTCACCGTGCCGCACAAGGAACAGGCGCTGGTCCTGGCCGACGAGGTCGAGCCTCTGGCCCGACGCATCGGCGCCGTCAACACCCTGGTCTGCCGCGACGACGGCTCGGTGCTGGGTTTGAACACCGACGCCTTCGGATTCCTGCGCAATTTGCAGACGGGGTCAAACTGGCGGGCGGAAAATGGTCCAGCGGTGGTCCTGGGGGCTGGCGGCGCGGCTCGTGCGGTGGTTGCCGCCTTGGTGGACGAAGGGGTGACGGAAATCCGCCTGGTCAACCGCAGTGTCGAGCGGGCGGAAAAGCTGGCCGCCGATATCGGTGGGCCGATCCTGGTGCAAGCCTGGGACAAGTTGGACCTGGACGGCGCCGGATTGCTGGTCAACACCACGTCGCTGGGCATGGCCGGCCAGCCGGCTTTGGACATCGACCTGTCCGCCCTGCCCATGAACGCCGTGGTCAACGACATCGTCTATGCCCCCTTGATGACGCCCTTGTTGTTGGCTGCACAGACGCGGGGCAACCCGGTGGTGGACGGTTTGGGCATGCTGCTGTTCCAGGCGGTGCGCGGCTTTAGCCACTGGTTCGGCGTCGAACCCCAGGTGACGCCGCAATTGCGTGATTTCGTGCTGTCGTCATGA
PROTEIN sequence
Length: 277
MILSGKAKLAGVLGWPVGHSRSPRLHGYWLEQLGIDGTYVPLPVAPENFEKVFRALPAMGFRGANVTVPHKEQALVLADEVEPLARRIGAVNTLVCRDDGSVLGLNTDAFGFLRNLQTGSNWRAENGPAVVLGAGGAARAVVAALVDEGVTEIRLVNRSVERAEKLAADIGGPILVQAWDKLDLDGAGLLVNTTSLGMAGQPALDIDLSALPMNAVVNDIVYAPLMTPLLLAAQTRGNPVVDGLGMLLFQAVRGFSHWFGVEPQVTPQLRDFVLSS*