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scnpilot_p_inoc_scaffold_16_curated_23

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 28072..29019

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CDK98120.1};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 315.0
  • Bit_score: 538
  • Evalue 5.70e-150
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 308.0
  • Bit_score: 407
  • Evalue 4.50e-111
Hydroxymethylbilane synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXY3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 315.0
  • Bit_score: 538
  • Evalue 4.10e-150

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGACGAAAACCGCAAACACCGCCAAACTCACCATCGGCACGCGCGGATCGCCGCTTGCCCTGGCTCAAACCCATGAAACCCGGGACCGCTTGGCGGCCGCCTGGCCGGAACTGGCGGGCGACGGCGCCATCGCCATCCAGGTGATCCAGACCACCGGCGACATGATCCAGAACCGCCCGCTGGCCGAAATCGGCGGCAAGGGGCTGTTCACCAAGGAACTGGACGATTCCATGCTGGACGGCCGCATCGATCTGGCGGTCCATTCCATGAAGGACGTCCCCACGGTGCTGCCCGACGGCATCATCCTGCCCTGCGTGCTGCCGCGCGAAGACGTGCGCGACGCCTTCATCTCGCCCAAGGCCAAGACCTTGATGGACCTGCCACAAGGTGCGGTGATCGGTTCGGCCAGCCTGCGGCGCGGCGCCCAGATCCTGCATCGCCGTCCCGACCTGAAGGTGGTGAACTTCCGCGGCAACGTCCAGTCGCGCCTGCGCAAGCTGGAAGAAGGGGTGGTCGACGCCACGCTTCTGGCCATGGCCGGCCTGAACCGCCTGGGCCTGTCCCAGCACGTCACCAGCGCCTTCGAGGTGGAAGACATGCTGCCGGCTGTGGCGCAGGGCGCCATTGGCATCACCTGCCGCCAAGGCGACGAACAGGCGCTGAAGTTCCTGGCGGCGCTGAACTGCCCCCAGACCATGATCCGCATCACCGCCGAGCGCGCCTTCCTGGCGACCTTGGACGGGTCGTGCCGCACCCCCATCGCCGCCTTGGCCACCATCGATGGCGACACGCTGTCGTTCAAAGGGCTGATCATCAGCCCCGACGGCAAGACCATCCATTGCACCAGCCGCCAAGGCACGGTGGGCGACGCCCAGGCCATGGGCGACGACGCCGGCCGCGAATTGCTGGCGGTGGCCGGTCCCGGCTTTTTCGACTTCAAGGCGTAA
PROTEIN sequence
Length: 316
MTKTANTAKLTIGTRGSPLALAQTHETRDRLAAAWPELAGDGAIAIQVIQTTGDMIQNRPLAEIGGKGLFTKELDDSMLDGRIDLAVHSMKDVPTVLPDGIILPCVLPREDVRDAFISPKAKTLMDLPQGAVIGSASLRRGAQILHRRPDLKVVNFRGNVQSRLRKLEEGVVDATLLAMAGLNRLGLSQHVTSAFEVEDMLPAVAQGAIGITCRQGDEQALKFLAALNCPQTMIRITAERAFLATLDGSCRTPIAALATIDGDTLSFKGLIISPDGKTIHCTSRQGTVGDAQAMGDDAGRELLAVAGPGFFDFKA*