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scnpilot_p_inoc_scaffold_16_curated_392

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(409281..409847)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 188.0
  • Bit_score: 312
  • Evalue 5.20e-82
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 182.0
  • Bit_score: 287
  • Evalue 4.00e-75
23S rRNA pseudouridine synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1M9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 188.0
  • Bit_score: 312
  • Evalue 3.70e-82

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TTGCCTCGGCTGGTGTTGTTCAACAAGCCTTATGACGTGCTGACCCAGTTCACCGACCGTGAACACGGGCGCGCCACCCTGGCCGATTACGTCAAGGCTCCCGGAATTTACCCGGCCGGGCGGTTGGATCGGGATTCTGAGGGGCTGCTGGTGCTGACTGATGATGGCGCCTTGGTGGCCAAGATCGCCCAGCCGCGCAACAAGATGCCCAAGGTCTATTACGCCCAGGTGGAAGGGCTGCCCACCGAACAGGCTTTGGATAGCCTGCGGCGAGGGGTGGTTTTGAAAGATGGGCCGACCTTGCCGGCGCTGGCGGAATGTGTGCCCGAACCCGCTTGGCTGTGGCCGCGTGATCCGTCCATTCGCTGGCGGGCCGCCATTCCCACCGCGTGGATCAGGCTGACATTGCGGGAAGGTCGGAACCGGCAGGTGCGCCGCATGACTGCGGCTGTGGGCTTGCCCACCCTGCGGCTGATCCGTTGGTCAGTTGGCGATTGGTCGCTAGAGGGCTTGGCCCCAGGTCAATGGAAGGACGTGGCGGCGCCGGAAGTTCGGCGCCGCCGCTAA
PROTEIN sequence
Length: 189
LPRLVLFNKPYDVLTQFTDREHGRATLADYVKAPGIYPAGRLDRDSEGLLVLTDDGALVAKIAQPRNKMPKVYYAQVEGLPTEQALDSLRRGVVLKDGPTLPALAECVPEPAWLWPRDPSIRWRAAIPTAWIRLTLREGRNRQVRRMTAAVGLPTLRLIRWSVGDWSLEGLAPGQWKDVAAPEVRRRR*